RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TNKS2Q9H2K2 1166 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 TMEM245Q9H330 911 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 SP110Q9HB58 689 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 TM7SF3Q9NS93 570 aa9.21□□□□□ -0.94
VCP-206ENST00000480327 IPO11Q9UI26 975 aaKnown RBP9.21□□□□□ -0.94
VCP-206ENST00000480327 HELZ2Q9BYK8 2649 aaKnown RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 CFAP46Q8IYW2 2715 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 C10orf142B7Z368 130 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 KCNK3O14649 394 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 NPC1O15118 1278 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 ZBTB24O43167 697 aaPredicted RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 PRAMEF11O60813 436 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 SIN3BO75182 1162 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 CD160O95971 181 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 PECAM1P16284 738 aaPredicted RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 CXCR5P32302 372 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 CETN2P41208 172 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 CSNK1EP49674 416 aaKnown RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 COPS2P61201 443 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 GNG11P61952 73 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 TFDP2Q14188 446 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 STARD3Q14849 445 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 TAZQ16635 292 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 KIF19Q2TAC6 998 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 Q6ZVU0 165 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 TMPRSS7Q7RTY8 843 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 ADAT2Q7Z6V5 191 aaKnown RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 PDZD3Q86UT5 571 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 VSIG1Q86XK7 387 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 SH2D3CQ8N5H7 860 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 ATPAF2Q8N5M1 289 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 CCNYQ8ND76 341 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 SETD7Q8WTS6 366 aaKnown RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 PRCCQ92733 491 aaPredicted RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 FAM118BQ9BPY3 351 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 OSBPL8Q9BZF1 889 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 PRSS16Q9NQE7 514 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 DTLQ9NZJ0 730 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 SUN2Q9UH99 717 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 HS3ST2Q9Y278 367 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.2□□□□□ -0.94
VCP-206ENST00000480327 PCDHB9Q9Y5E1 797 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 SNX11Q9Y5W9 270 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 ATMQ13315 3056 aa9.2□□□□□ -0.94
VCP-206ENST00000480327 MGAQ8IWI9 3026 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 EDDM13A0A1B0GTR0 161 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 TCRBV7S2A1N4TA0A589 114 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 ZNF487B1APH4 448 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 ATP9BO43861 1147 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 MAFKO60675 156 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 TMCC1O94876 653 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 ATP1A1P05023 1023 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 ZFXP17010 805 aaPredicted RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 OXTRP30559 389 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 GARSP41250 739 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 SERPINH1P50454 418 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 RHOAP61586 193 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 RPS14P62263 151 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 IL10RBQ08334 325 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 GALNT2Q10471 571 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 E2F5Q15329 346 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 CYTH1Q15438 398 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 PPP2R5EQ16537 467 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 HNRNPA1L2Q32P51 320 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 ATXN7L2Q5T6C5 722 aaPredicted RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 C9orf64Q5T6V5 341 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 SEL1L2Q5TEA6 688 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 C22orf39Q6P5X5 142 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 BBS12Q6ZW61 710 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 ZC3H18Q86VM9 953 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 STK40Q8N2I9 435 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 RYBPQ8N488 228 aaPredicted RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.19□□□□□ -0.94
VCP-206ENST00000480327 OR6K2Q8NGY2 324 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 OR2T3Q8NH03 318 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 FRS2Q8WU20 508 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 P3H4Q92791 437 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 PTPRN2Q92932 1015 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 BIRC7Q96CA5 298 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 CRELD1Q96HD1 420 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 EXOC2Q96KP1 924 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 WDR24Q96S15 920 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 LGMNQ99538 433 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 TM6SF2Q9BZW4 377 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 CCDC86Q9H6F5 360 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 C10orf88Q9H8K7 445 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 EBF2Q9HAK2 575 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 PDFQ9HBH1 243 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 TM9SF3Q9HD45 589 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 SEPT10Q9P0V9 454 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 APOBEC2Q9Y235 224 aaKnown RBP9.19□□□□□ -0.94
VCP-206ENST00000480327 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 PCDHGB2Q9Y5G2 931 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 KNTC1P50748 2209 aa9.19□□□□□ -0.94
VCP-206ENST00000480327 TTC24A2A3L6 582 aaPredicted RBP9.18□□□□□ -0.94
VCP-206ENST00000480327 FAM149AA5PLN7 773 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms