RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CCAR2Q8N163 923 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 CPXM2Q8N436 756 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 NIPA2Q8N8Q9 360 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 BVESQ8NE79 360 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 FAM71BQ8TC56 605 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 DDI1Q8WTU0 396 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 RSAD2Q8WXG1 361 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 CENPIQ92674 756 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ARHGEF26Q96DR7 871 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SLC39A13Q96H72 371 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 FCRL2Q96LA5 508 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 XPO6Q96QU8 1125 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 HAPLN3Q96S86 360 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 CDC6Q99741 560 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 AARSD1Q9BTE6 412 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 PLA2G2FQ9BZM2 168 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 PRDM14Q9GZV8 571 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 TKTL2Q9H0I9 626 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 C8orf33Q9H7E9 229 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SUDS3Q9H7L9 328 aaPredicted RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 VIPAS39Q9H9C1 493 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 TRPV5Q9NQA5 729 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SLC2A4RGQ9NR83 387 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SPHK2Q9NRA0 654 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 PIGVQ9NUD9 493 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SPATS2LQ9NUQ6 558 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 ARHGEF38Q9NXL2 777 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 GGA2Q9UJY4 613 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 AGO1Q9UL18 857 aaKnown RBP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.35□□□□□ -1.39
SF3B1-209ENST00000479532 WNT6Q9Y6F9 365 aa6.35□□□□□ -1.39
SF3B1-209ENST00000479532 REV3LO60673 3130 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 SRRM3A6NNA2 597 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MAN2B1O00754 1011 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PJA2O43164 708 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 TBX1O43435 398 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 SPOPO43791 374 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MTA2O94776 668 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PROSCO94903 275 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CBX7O95931 251 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 KRT7P08729 469 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 TACR2P21452 398 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 L1CAMP32004 1257 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 HTR7P34969 479 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PCK1P35558 622 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CD151P48509 253 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF135P52742 658 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 GYS2P54840 703 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 HADHBP55084 474 aaKnown RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MLLT6P55198 1093 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 OXCT1P55809 520 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 HDAC4P56524 1084 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PITX1P78337 314 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CCZ1BP86790 482 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CCZ1P86791 482 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PRKCQQ04759 706 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 E2F5Q15329 346 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 DHCR24Q15392 516 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 ANO4Q32M45 955 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 BOLA3Q53S33 107 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 ZC3H12BQ5HYM0 836 aaKnown RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 YOD1Q5VVQ6 348 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 RAP1GAP2Q684P5 730 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 TRIM68Q6AZZ1 485 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 TRNP1Q6NT89 227 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 TPGS1Q6ZTW0 290 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 DAAM2Q86T65 1068 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CILP2Q8IUL8 1156 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 PSTKQ8IV42 348 aaKnown RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 LGI2Q8N0V4 545 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 RNF10Q8N5U6 811 aaKnown RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 HJURPQ8NCD3 748 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CCDC26Q8TAB7 109 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 GATA6Q92908 595 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 NTAN1Q96AB6 310 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 RSPRY1Q96DX4 576 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 TMA16Q96EY4 203 aaKnown RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 ZFYVE19Q96K21 471 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CABS1Q96KC9 395 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 EXOC2Q96KP1 924 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 Q96M66 194 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 RPRD1AQ96P16 312 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 ALS2CR12Q96Q35 445 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 DESI2Q9BSY9 194 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 BBS2Q9BXC9 721 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 SIK2Q9H0K1 926 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 EBF3Q9H4W6 596 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 ECT2Q9H8V3 914 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 GFOD1Q9NXC2 390 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 CGGBP1Q9UFW8 167 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MUTYHQ9UIF7 546 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MCM8Q9UJA3 840 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 STOML2Q9UJZ1 356 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 USP18Q9UMW8 372 aa6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MRPS17Q9Y2R5 130 aaKnown RBP6.34□□□□□ -1.39
SF3B1-209ENST00000479532 MACROD2A1Z1Q3 448 aa6.33□□□□□ -1.4
SF3B1-209ENST00000479532 NEDD8-MDP1E9PL57 170 aa6.33□□□□□ -1.4
SF3B1-209ENST00000479532 H0Y626 953 aa6.33□□□□□ -1.4
SF3B1-209ENST00000479532 PDLIM1O00151 329 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms