RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PDLIM2Q96JY6 352 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PSKH2Q96QS6 385 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 OSBPL1AQ9BXW6 950 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 HDAC8Q9BY41 377 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 ATP13A3Q9H7F0 1226 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 SCUBE2Q9NQ36 999 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 FSCN3Q9NQT6 498 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 SEMA4GQ9NTN9 838 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 GGT7Q9UJ14 662 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 ITM2BQ9Y287 266 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.98□□□□□ -1.29
BRCA1-215ENST00000478531 PCDHGA5Q9Y5G8 931 aa6.98□□□□□ -1.29
BRCA1-215ENST00000478531 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.98□□□□□ -1.29
BRCA1-215ENST00000478531 METTL12A8MUP2 240 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 MIF4GDA9UHW6 222 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 MATN3O15232 486 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 SLC7A4O43246 635 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 HLA-DQB2P05538 268 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 IGHV4-34P06331 123 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PYGMP11217 842 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 CCNB1P14635 433 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TGM2P21980 687 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 XPAP23025 273 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 CCNCP24863 283 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 CETN2P41208 172 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 ABL2P42684 1182 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PEX5P50542 639 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TAS2R38P59533 333 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 COPS2P61201 443 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 BCL2L1Q07817 233 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PPIDQ08752 370 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC15Q0P6D6 951 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PPP2R5EQ16537 467 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TAZQ16635 292 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 AASDHQ4L235 1098 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TRIM61Q5EBN2 209 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 KIAA0895LQ68EN5 471 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 C12orf50Q8NA57 414 aaPredicted RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 P3H4Q92791 437 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 KLK6Q92876 244 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 LRIG1Q96JA1 1093 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 OLFM3Q96PB7 478 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PHF12Q96QT6 1004 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 MYOCQ99972 504 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 FAM118BQ9BPY3 351 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 MGME1Q9BQP7 344 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 HERPUD2Q9BSE4 406 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 OSBPL8Q9BZF1 889 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 VPS45Q9NRW7 570 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 RBM22Q9NW64 420 aaKnown RBP eCLIP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PILRBQ9UKJ0 227 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 SLCO1B1Q9Y6L6 691 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 ASCC3Q8N3C0 2202 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 CABIN1Q9Y6J0 2220 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PCDH15Q96QU1 1955 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 DDX3YO15523 660 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 RNGTTO60942 597 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 LRP3O75074 770 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 JCHAINP01591 159 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PRKCGP05129 697 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 GNSP15586 552 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PRLRP16471 622 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 HSPA9P38646 679 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 AP1S1P61966 158 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 SEMG2Q02383 582 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 NSUN2Q08J23 767 aaKnown RBP eCLIP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 ZBTB17Q13105 803 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 HNRNPDQ14103 355 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 GRM3Q14832 879 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 LAYNQ6UX15 382 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PRR23CQ6ZRP0 262 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 BBS12Q6ZW61 710 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 ADAT2Q7Z6V5 191 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TTC7BQ86TV6 843 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TFB1MQ8WVM0 346 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 MAML1Q92585 1016 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 VOPP1Q96AW1 172 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 HES6Q96HZ4 224 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TSGA13Q96PP4 275 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TUBGCP5Q96RT8 1024 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 SEMA3CQ99985 751 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 CPEB1Q9BZB8 566 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 POLR1EQ9GZS1 481 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PCED1AQ9H1Q7 454 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 SUV39H2Q9H5I1 410 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 NOD2Q9HC29 1040 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PREBQ9HCU5 417 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 HAUS2Q9NVX0 235 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TRMT1Q9NXH9 659 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 PCDHGC4Q9Y5F7 938 aa6.97□□□□□ -1.29
BRCA1-215ENST00000478531 TDRD6O60522 2096 aaKnown RBP6.97□□□□□ -1.29
BRCA1-215ENST00000478531 A0A1W2PQU0 124 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 LNP1A1A4G5 178 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 F5H423 210 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 H7C0C1 242 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 APOC4-APOC2K7ER74 178 aa6.96□□□□□ -1.3
BRCA1-215ENST00000478531 KHNYNO15037 678 aaKnown RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 BCAT2O15382 392 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-215ENST00000478531 GDF9O60383 454 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms