RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 ANKRD33Q7Z3H0 272 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 OR4L1Q8NH43 312 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 SEC16BQ96JE7 1060 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 VCX3BQ9H321 246 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 ANKRD6Q9Y2G4 727 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 SCN4AP35499 1836 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 ZNF840PA6NDX5 716 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 COCHO43405 550 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 PRNPP04156 253 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 RHOP08100 348 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 HNRNPA1P09651 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCCB-214ENST00000478469 ELFN1P0C7U0 828 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 SESN3P58005 492 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 UBE3AQ05086 875 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 RFTN1Q14699 578 aaPredicted RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 SLC9A4Q6AI14 798 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 DOK6Q6PKX4 331 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 ZNF572Q7Z3I7 529 aaPredicted RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 ANKS1BQ7Z6G8 1248 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 OR4K2Q8NGD2 314 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 TACO1Q9BSH4 297 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 MYH15Q9Y2K3 1946 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 SDK1Q7Z5N4 2213 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 TRPC5OSA6NMA1 111 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 ANKRD65E5RJM6 399 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 TXNDC9O14530 226 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 DNTTP04053 509 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 BGNP21810 368 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 CSKP41240 450 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 CMTM8Q8IZV2 173 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 IQCKQ8N0W5 287 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 PHOSPHO2Q8TCD6 241 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 MCOLN3Q8TDD5 553 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 KCNN1Q92952 543 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 CHRAC1Q9NRG0 131 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 DZANK1Q9NVP4 752 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 PSD3Q9NYI0 1048 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 MCM3APO60318 1980 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 RAD51BO15315 384 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 SKAP2O75563 359 aaPredicted RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 DGKIO75912 1065 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 METTL18O95568 372 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 ARL4DP49703 201 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 HSPA14Q0VDF9 509 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 DDX39BQ13838 428 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 PAFAH1B3Q15102 231 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 RAET1GQ6H3X3 334 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 ZNF598Q86UK7 904 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 SUGP1Q8IWZ8 645 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
PCCB-214ENST00000478469 ERP27Q96DN0 273 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 FAR2Q96K12 515 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 CEP295NLQ96MC4 621 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 COPS8Q99627 209 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 SYNDIG1Q9H7V2 258 aa12.12□□□□□ -0.47
PCCB-214ENST00000478469 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 TPP1O14773 563 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 ITGA2BP08514 1039 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 MZF1P28698 734 aaPredicted RBP12.11□□□□□ -0.47
PCCB-214ENST00000478469 DSC1Q08554 894 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 CAMK2GQ13555 558 aaPredicted RBP12.11□□□□□ -0.47
PCCB-214ENST00000478469 FAM45BPQ6NSW5 357 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 KYAT3Q6YP21 454 aaKnown RBP12.11□□□□□ -0.47
PCCB-214ENST00000478469 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 TTC9BQ8N6N2 239 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 FAM45AQ8TCE6 357 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 WFIKKN2Q8TEU8 576 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 ZNF599Q96NL3 588 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 BTN3A1O00481 513 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 CYP2A7P20853 494 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 MC4RP32245 332 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 CDK7P50613 346 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 SLC10A7Q0GE19 358 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 DLG2Q15700 870 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
PCCB-214ENST00000478469 STXBP5Q5T5C0 1151 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 SLCO2A1Q92959 643 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 SDCCAG3Q96C92 435 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 FCRL5Q96RD9 977 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 NEUROG2Q9H2A3 272 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 TBC1D30Q9Y2I9 924 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 WNT6Q9Y6F9 365 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 CITO14578 2027 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 CD3EAPO15446 510 aaKnown RBP12.11□□□□□ -0.47
PCCB-214ENST00000478469 TGM5O43548 720 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 FAM189A1O60320 539 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 KLHL2O95198 593 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 GUCA1CO95843 209 aa12.11□□□□□ -0.47
PCCB-214ENST00000478469 DDX5P17844 614 aaKnown RBP12.11□□□□□ -0.47
PCCB-214ENST00000478469 KCNA4P22459 653 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms