RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 TP53I13Q8NBR0 393 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 ZNF248Q8NDW4 579 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 NEK11Q8NG66 645 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 CXorf40AQ8TE69 158 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 CENPTQ96BT3 561 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 HMCESQ96FZ2 354 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 HIC2Q96JB3 615 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 TBATAQ96M53 351 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 ZNF578Q96N58 590 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 LGMNQ99538 433 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 IL12RB2Q99665 862 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 C1QTNF7Q9BXJ2 289 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 TCEAL2Q9H3H9 227 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 FANCLQ9NW38 375 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 SPASTQ9UBP0 616 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 DKK3Q9UBP4 350 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 PNMA8BQ9ULN7 279 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-236ENST00000477477 MFHAS1Q9Y4C4 1052 aa11.51□□□□□ -0.57
HDLBP-236ENST00000477477 CHD5Q8TDI0 1954 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 CPED1A4D0V7 1026 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 RASA4BC9J798 803 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 TK2O00142 265 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 TOR1BO14657 336 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 RASA4O43374 803 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 GCATO75600 419 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 TM7SF2O76062 418 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 TIMP2P16035 220 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 TGM2P21980 687 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 LSSP48449 732 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 AIF1P55008 147 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 ERVPABLB-1P60509 514 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 YPEL5P62699 121 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
HDLBP-236ENST00000477477 SERINC3Q13530 473 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 NR0B2Q15466 257 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 ISXQ2M1V0 245 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 PARP15Q460N3 678 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 DNAJC24Q6P3W2 148 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 SCYL2Q6P3W7 929 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 MACC1Q6ZN28 852 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 EFL1Q7Z2Z2 1120 aaKnown RBP11.5□□□□□ -0.57
HDLBP-236ENST00000477477 GPR155Q7Z3F1 870 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 NETO2Q8NC67 525 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 SLC39A7Q92504 469 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 PCMTD1Q96MG8 357 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-236ENST00000477477 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 EPAS1Q99814 870 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 LRRC61Q9BV99 259 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 BOCQ9BWV1 1114 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 CATSPERBQ9H7T0 1116 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 POLR1BQ9H9Y6 1135 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 MBNL1Q9NR56 388 aaKnown RBP11.5□□□□□ -0.57
HDLBP-236ENST00000477477 SEPT11Q9NVA2 429 aaKnown RBP11.5□□□□□ -0.57
HDLBP-236ENST00000477477 LHX3Q9UBR4 397 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 LIMA1Q9UHB6 759 aaKnown RBP11.5□□□□□ -0.57
HDLBP-236ENST00000477477 FZD10Q9ULW2 581 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 KALRNO60229 2985 aa11.5□□□□□ -0.57
HDLBP-236ENST00000477477 TEX51A0A1B0GUA7 166 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 ANKRD62A6NC57 917 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 LMO7DNF2Z398 122 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 INSIG1O15503 277 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 CREB3O43889 395 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 PRB1P04280 392 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 ITIH2P19823 946 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 SUOXP51687 545 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 RPL7AP62424 266 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 CXADRP78310 365 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 MYL5Q02045 173 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 C1orf61Q13536 156 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 IRF4Q15306 451 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 KLHL40Q2TBA0 621 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 PRRT3Q5FWE3 981 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 PERM1Q5SV97 790 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 IGF2-ASQ6U949 168 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 CRTC1Q6UUV9 634 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 SLC35F3Q8IY50 421 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 UMODL1-AS1Q8N2C9 162 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 LSM14AQ8ND56 463 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 GLMNQ92990 594 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 NAF1Q96HR8 494 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 EXOC2Q96KP1 924 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 ERGIC2Q96RQ1 377 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 AGPAT1Q99943 283 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 CNPY3Q9BT09 278 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 WRAP53Q9BUR4 548 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 CPEB1Q9BZB8 566 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 SLC13A1Q9BZW2 595 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 PDFQ9HBH1 243 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 ASCL3Q9NQ33 180 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 THSD1Q9NS62 852 aa11.49□□□□□ -0.57
HDLBP-236ENST00000477477 UBA2Q9UBT2 640 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms