RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 PAK6Q9NQU5 681 aaPredicted RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 RUVBL2Q9Y230 463 aaKnown RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 ACOT9Q9Y305 439 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 BACE2Q9Y5Z0 518 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 MAGEC1O60732 1142 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 FKTNO75072 461 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 ENTPD5O75356 428 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 WISP3O95389 354 aaPredicted RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 TPBGLP0DKB5 382 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 CPOXP36551 454 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 NUMBP49757 651 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 POU4F1Q01851 419 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 ACVR1Q04771 509 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 BTG3Q14201 252 aaPredicted RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 ZNF789Q5FWF6 425 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 CNSTQ6PJW8 725 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 OVCA2Q8WZ82 227 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 RETREG1Q9H6L5 497 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 CWH43Q9H720 699 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 COG4Q9H9E3 785 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 NOP53Q9NZM5 478 aaKnown RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 APOBEC2Q9Y235 224 aaKnown RBP11.6□□□□□ -0.55
NUP188-205ENST00000477069 GBF1Q92538 1859 aa11.6□□□□□ -0.55
NUP188-205ENST00000477069 A0A087X1B8 175 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 B2RBV5 119 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 LDB2O43679 373 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 EZRP15311 586 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 SAT1P21673 171 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 ITKQ08881 620 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 USP4Q13107 963 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 RBM20Q5T481 1227 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 TMCO4Q5TGY1 634 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 KLHDC10Q6PID8 442 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 OR52K2Q8NGK3 314 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 MAPK15Q8TD08 544 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 STON2Q8WXE9 905 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 ZNF599Q96NL3 588 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 CDK5RAP1Q96SZ6 601 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 OLFM1Q99784 485 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 IGSF5Q9NSI5 407 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 XPR1Q9UBH6 696 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 C15orf41Q9Y2V0 281 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 SLC7A4O43246 635 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 DLX3O60479 287 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 ACSL4O60488 711 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 HSPA4LO95757 839 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 CHRNGP07510 517 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 MAP2K2P36507 400 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 GRIA4P48058 902 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 GLRBP48167 497 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 RCN2Q14257 317 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 TLDC1Q6P9B6 456 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 LGI2Q8N0V4 545 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 LSMEM2Q8N112 164 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 CFAP61Q8NHU2 1237 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 NSMCE1Q8WV22 266 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 MOCOSQ96EN8 888 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 ELMO2Q96JJ3 720 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 FEM1CQ96JP0 617 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 PRICKLE1Q96MT3 831 aaPredicted RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 MFSD1Q9H3U5 465 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.59□□□□□ -0.55
NUP188-205ENST00000477069 MCM8Q9UJA3 840 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 DNMT3LQ9UJW3 386 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 ZNF840PA6NDX5 716 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 F5H5T6 163 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 GJB5O95377 273 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 HMGA1P17096 107 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 ARSDP51689 593 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 HK2P52789 917 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 KDSRQ06136 332 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 TSNAXIP1Q2TAA8 658 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 KHDC1Q4VXA5 237 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 SLC9B1Q4ZJI4 515 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 CILP2Q8IUL8 1156 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 TDRD5Q8NAT2 981 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 CALML6Q8TD86 181 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 WDR60Q8WVS4 1066 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 SREK1Q8WXA9 508 aaKnown RBP11.59□□□□□ -0.55
NUP188-205ENST00000477069 NUDCD1Q96RS6 583 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 TRIB3Q96RU7 358 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 SEMA3CQ99985 751 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 RAP2CQ9Y3L5 183 aa11.59□□□□□ -0.55
NUP188-205ENST00000477069 A0A0D9SEW6 157 aa11.58□□□□□ -0.56
NUP188-205ENST00000477069 MATN2O00339 956 aa11.58□□□□□ -0.56
NUP188-205ENST00000477069 PQBP1O60828 265 aaKnown RBP11.58□□□□□ -0.56
NUP188-205ENST00000477069 SEC24AO95486 1093 aa11.58□□□□□ -0.56
NUP188-205ENST00000477069 RPL17P18621 184 aaKnown RBP11.58□□□□□ -0.56
NUP188-205ENST00000477069 MPSTP25325 297 aa11.58□□□□□ -0.56
NUP188-205ENST00000477069 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
NUP188-205ENST00000477069 ETFBP38117 255 aa11.58□□□□□ -0.56
NUP188-205ENST00000477069 CCR10P46092 362 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms