RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 TMEM145Q8NBT3 493 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 ZNF830Q96NB3 372 aaPredicted RBP10.34□□□□□ -0.75
CCM2-208ENST00000476594 CSPG4P5Q96PW8 444 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 SLC39A8Q9C0K1 460 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 PDFQ9HBH1 243 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 CWC15Q9P013 229 aaKnown RBP10.34□□□□□ -0.75
CCM2-208ENST00000476594 NEUROG3Q9Y4Z2 214 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 ACTL7AQ9Y615 435 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 SLCO1B1Q9Y6L6 691 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 PCNX2A6NKB5 2137 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 PLXNA2O75051 1894 aa10.34□□□□□ -0.75
CCM2-208ENST00000476594 ACACBO00763 2458 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 TMEM8BA6NDV4 472 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 NEMP2A6NFY4 417 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 J3KR12 359 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 CBFA2T3O75081 653 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 LDOC1O95751 146 aaPredicted RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 PAK4O96013 591 aaPredicted RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 MAN1A1P33908 653 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 THOP1P52888 689 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 HNRNPKP61978 463 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCM2-208ENST00000476594 SLC25A11Q02978 314 aaKnown RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 RALGPS1Q5JS13 557 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 AFMIDQ63HM1 303 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 TIGD7Q6NT04 549 aaPredicted RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 CYP4V2Q6ZWL3 525 aaPredicted RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 ABI3BPQ7Z7G0 1075 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 SRLQ86TD4 932 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 NDUFAF2Q8N183 169 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 GALNT15Q8N3T1 639 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 KCTD6Q8NC69 237 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 ATL2Q8NHH9 583 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 ADAMTS14Q8WXS8 1223 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 KLK6Q92876 244 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 EXOC2Q96KP1 924 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 CAMK1GQ96NX5 476 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 LENG8Q96PV6 779 aaPredicted RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 PSKH2Q96QS6 385 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 MYOCQ99972 504 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 ZNF670Q9BS34 389 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 NHEJ1Q9H9Q4 299 aaPredicted RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 PCDH18Q9HCL0 1135 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 KLHL11Q9NVR0 708 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 LHX3Q9UBR4 397 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 INTUQ9ULD6 942 aa10.33□□□□□ -0.76
CCM2-208ENST00000476594 ZFR2Q9UPR6 939 aaKnown RBP10.33□□□□□ -0.76
CCM2-208ENST00000476594 TSPAN11A1L157 253 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 KCNK3O14649 394 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 AREL1O15033 823 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 C1SP09871 688 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 MX2P20592 715 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 CA4P22748 312 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 AMPD1P23109 780 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 IL1R2P27930 398 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 GKP32189 559 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 GJC1P36383 396 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 ARHGAP25P42331 645 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 ABL2P42684 1182 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 YPEL5P62699 121 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 IL9RQ01113 521 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 CYTH1Q15438 398 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 UGP2Q16851 508 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 SEL1L3Q68CR1 1132 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 PARGQ86W56 976 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 ARHGAP12Q8IWW6 846 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 BAHD1Q8TBE0 780 aaPredicted RBP10.32□□□□□ -0.76
CCM2-208ENST00000476594 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.32□□□□□ -0.76
CCM2-208ENST00000476594 SAP25Q8TEE9 199 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 BTN2A2Q8WVV5 523 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 RFFLQ8WZ73 363 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 BTBD6Q96KE9 485 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 CNDP2Q96KP4 475 aaKnown RBP10.32□□□□□ -0.76
CCM2-208ENST00000476594 CNTNAP3BQ96NU0 1288 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 DUSP23Q9BVJ7 150 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 SCNM1Q9BWG6 230 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 CNTNAP3Q9BZ76 1288 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 KLC2Q9H0B6 622 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 KCTD5Q9NXV2 234 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 MSRB2Q9Y3D2 182 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 PCDHGA1Q9Y5H4 931 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 CEP295Q9C0D2 2601 aa10.32□□□□□ -0.76
CCM2-208ENST00000476594 TRPM6Q9BX84 2022 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 CFAP69A5D8W1 941 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 IGLON5A6NGN9 336 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 TMEM110-MUSTN1A8MSY1 372 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 ENC1O14682 589 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 WNT9AO14904 365 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 HYAL3O43820 417 aaPredicted RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 LZTS3O60299 673 aaPredicted RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 SOCS5O75159 536 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 PIGNO95427 931 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 CES1P23141 567 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 HTR1BP28222 390 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms