RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CBFA2T3O75081 653 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 ZNF821O75541 412 aaPredicted RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 CER1O95813 267 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 RHOXF2BP0C7M4 288 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 L1CAMP32004 1257 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 HTR7P34969 479 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 ARSEP51690 589 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 RACK1P63244 317 aaKnown RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 SLC20A2Q08357 652 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 DPYSL3Q14195 570 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 KIF19Q2TAC6 998 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 HLA-BQ31612 363 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 ACCSLQ4AC99 568 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 PPP6R3Q5H9R7 873 aaPredicted RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FAM72AQ5TYM5 149 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 AGBL4Q5VU57 503 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FAM46CQ5VWP2 391 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FAM72DQ6L9T8 149 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FAM72BQ86X60 149 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 PRELID2Q8N945 189 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 OR7D4Q8NG98 312 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 SNX19Q92543 992 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 RHOXF2Q9BQY4 288 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 ACE2Q9BYF1 805 aaPredicted RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 MAGEB5Q9BZ81 275 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 DDX47Q9H0S4 455 aaKnown RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 RAB17Q9H0T7 212 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 GAREM1Q9H706 876 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 IL21RQ9HBE5 538 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 PCDH18Q9HCL0 1135 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 PCYOX1Q9UHG3 505 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 ANKRD6Q9Y2G4 727 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FNDC3AQ9Y2H6 1198 aaKnown RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 PCDHGB2Q9Y5G2 931 aa15.88■□□□□ 0.13
CPSF3-203ENST00000475482 KMT2BQ9UMN6 2715 aaPredicted RBP15.88■□□□□ 0.13
CPSF3-203ENST00000475482 FAM187AA6NFU0 413 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 VILLO15195 856 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 PLRG1O43660 514 aaKnown RBP15.87■□□□□ 0.13
CPSF3-203ENST00000475482 SH3BP5O60239 455 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 CST8O60676 142 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 LRIG2O94898 1065 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 CD160O95971 181 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 GAS8O95995 478 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 CTSLP07711 333 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 KRT10P13645 584 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 TGM2P21980 687 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 GLDCP23378 1020 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 MAPKAPK2P49137 400 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 FAM193AP78312 1265 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 ARF5P84085 180 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 DR1Q01658 176 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 GNA12Q03113 381 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 TEAD4Q15561 434 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 DRICH1Q6PGQ1 229 aaPredicted RBP15.87■□□□□ 0.13
CPSF3-203ENST00000475482 CCDC137Q6PK04 289 aaKnown RBP15.87■□□□□ 0.13
CPSF3-203ENST00000475482 SYDE1Q6ZW31 735 aaPredicted RBP15.87■□□□□ 0.13
CPSF3-203ENST00000475482 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
CPSF3-203ENST00000475482 CCDC185Q8N715 623 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 ATP11CQ8NB49 1132 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 TMIEQ8NEW7 156 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 PIP4K2CQ8TBX8 421 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 RNF157Q96PX1 679 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 EPAS1Q99814 870 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 LRRC1Q9BTT6 524 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 NDFIP2Q9NV92 336 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 TMEM248Q9NWD8 314 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 SNX11Q9Y5W9 270 aa15.87■□□□□ 0.13
CPSF3-203ENST00000475482 ARID1BQ8NFD5 2236 aaPredicted RBP15.87■□□□□ 0.13
CPSF3-203ENST00000475482 USP24Q9UPU5 2620 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 SPEGQ15772 3267 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 A0A1W2PR77 199 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 FAM47DPA6NHR8 397 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 C1QTNF3-AMACRE9PGA6 284 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 APOC4-APOC2K7ER74 178 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 APOL1O14791 398 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 ZNF189O75820 626 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 APOC2P02655 101 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 RHOQP17081 205 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 COILP38432 576 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 CTSKP43235 329 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 HCAR3P49019 387 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 SERPINH1P50454 418 aaKnown RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 TAS2R38P59533 333 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 CNTN1Q12860 1018 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 SIX1Q15475 284 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 ZNF423Q2M1K9 1284 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 ANKRD20A8PQ5CZ79 823 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 RETSATQ6NUM9 610 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 C22orf39Q6P5X5 142 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 GLRX5Q86SX6 157 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 IFT20Q8IY31 132 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 OR14C36Q8NHC7 312 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 ATL2Q8NHH9 583 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 BAHD1Q8TBE0 780 aaPredicted RBP15.86■□□□□ 0.13
CPSF3-203ENST00000475482 SLCO2A1Q92959 643 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 FAF2Q96CS3 445 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 CEP44Q9C0F1 390 aa15.86■□□□□ 0.13
CPSF3-203ENST00000475482 TM7SF3Q9NS93 570 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms