RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PHLPP2Q6ZVD8 1323 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 LOC390937A0A1W2PQ73 354 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM86B1E9PN63 330 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 M0R296 226 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 DNM1LO00429 736 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PPIP5K2O43314 1243 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MED7O43513 233 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ADAM11O75078 769 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 H2AFYO75367 372 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FRAT2O75474 233 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CIB2O75838 187 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 DNAJB5O75953 348 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ARHGEF15O94989 841 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SPDEFO95238 335 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 GDF11O95390 407 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PIGNO95427 931 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ALDH2P05091 517 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 HSMCR30P0CW71 290 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MYF5P13349 255 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 LAMP2P13473 410 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 EDN3P14138 238 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CPB1P15086 417 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TATP17735 454 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MAT2AP31153 395 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 KCNJ5P48544 419 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 RGS7P49802 495 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 AGFG1P52594 562 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 P2RX3P56373 397 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 STX17P56962 302 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CHRNDQ07001 517 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CAPSQ13938 189 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 POU4F3Q15319 338 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SMTNL2Q2TAL5 461 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TWISTNBQ3B726 338 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 HERC4Q5GLZ8 1057 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SPATA46Q5T0L3 261 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 THEMIS2Q5TEJ8 643 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TIGD7Q6NT04 549 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM83HQ6ZRV2 1179 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MIER3Q7Z3K6 550 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 VASH2Q86V25 355 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SRRM1Q8IYB3 904 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CRYBG2Q8N1P7 616 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SCML4Q8N228 414 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 EIF1ADQ8N9N8 165 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TRPV3Q8NET8 790 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 NEK11Q8NG66 645 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FANK1Q8TC84 345 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MUL1Q969V5 352 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 AZIN2Q96A70 460 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MIPEPQ99797 713 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 AARSD1Q9BTE6 412 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 BBS2Q9BXC9 721 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 EXO5Q9H790 373 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TMPRSS11EQ9UL52 423 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 NFAT5O94916 1531 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CCDC154A6NI56 674 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 FADS2P1A8MWK0 482 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 HIP1O00291 1037 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SHOXO15266 292 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 PCDH8O95206 1070 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 LIPFP07098 398 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 UMPSP11172 480 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CYP2B6P20813 491 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 NR2F2P24468 414 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TNFRSF8P28908 595 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 LRPAP1P30533 357 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 PCYT1AP49585 367 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CCT4P50991 539 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 MTTPP55157 894 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 DSG1Q02413 1049 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SCRN3Q0VDG4 424 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 FADDQ13158 208 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SF3B4Q15427 424 aaKnown RBP eCLIP6.16□□□□□ -1.425e-11■■□□□ 13.3
SMARCE1-208ENST00000474246 SLC35G1Q2M3R5 365 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 GPAT3Q53EU6 434 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC44A4Q53GD3 710 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ATAD3BQ5T9A4 648 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 RIPPLY2Q5TAB7 128 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TTC23LQ6PF05 361 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 USP17L6PQ6QN14 398 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 LAYNQ6UX15 382 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 FRMD5Q7Z6J6 570 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 DDIASQ8IXT1 998 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ZGPATQ8N5A5 531 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 GPR150Q8NGU9 434 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 OR10Z1Q8NGY1 313 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 AKR7LQ8NHP1 331 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 RAB3IL1Q8TBN0 382 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 STT3BQ8TCJ2 826 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ATP8B4Q8TF62 1192 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 LIPHQ8WWY8 451 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 C18orf8Q96DM3 657 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 NOL6Q9H6R4 1146 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms