RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 APOBEC3BQ9UH17 382 aaKnown RBP20.01■□□□□ 0.79
COL9A3-210ENST00000472880 KLF15Q9UIH9 416 aa20.01■□□□□ 0.79
COL9A3-210ENST00000472880 FZD10Q9ULW2 581 aa20.01■□□□□ 0.79
COL9A3-210ENST00000472880 U3KQA8 63 aa20.01■□□□□ 0.79
COL9A3-210ENST00000472880 TCRBV5S1A1TA0A578 114 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 RIOK3O14730 519 aaKnown RBP20■□□□□ 0.79
COL9A3-210ENST00000472880 FGF10O15520 208 aaPredicted RBP20■□□□□ 0.79
COL9A3-210ENST00000472880 FERP16591 822 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 XPAP23025 273 aaPredicted RBP20■□□□□ 0.79
COL9A3-210ENST00000472880 RPL7AP62424 266 aaKnown RBP20■□□□□ 0.79
COL9A3-210ENST00000472880 EIF2B5Q13144 721 aaKnown RBP20■□□□□ 0.79
COL9A3-210ENST00000472880 SERINC3Q13530 473 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 DEFB133Q30KQ1 61 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 NETO2Q8NC67 525 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 CENPTQ96BT3 561 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 BBC3Q96PG8 261 aaPredicted RBP20■□□□□ 0.79
COL9A3-210ENST00000472880 IL12RB2Q99665 862 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 KLC2Q9H0B6 622 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 SPASTQ9UBP0 616 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 DKK3Q9UBP4 350 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 MFHAS1Q9Y4C4 1052 aa20■□□□□ 0.79
COL9A3-210ENST00000472880 WASH4PA8MWX3 477 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 MMP20O60882 483 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 CSO75390 466 aaKnown RBP19.99■□□□□ 0.79
COL9A3-210ENST00000472880 TPI1P60174 286 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 CDKN3Q16667 212 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 PPP1R15BQ5SWA1 713 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 PHACTR4Q8IZ21 702 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 RBFAQ8N0V3 343 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 UMODL1-AS1Q8N2C9 162 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 EXOC2Q96KP1 924 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 UBL7Q96S82 380 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-210ENST00000472880 WRAP53Q9BUR4 548 aaKnown RBP19.99■□□□□ 0.79
COL9A3-210ENST00000472880 DONSONQ9NYP3 566 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 UBA2Q9UBT2 640 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-210ENST00000472880 SALL4Q9UJQ4 1053 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 BAHCC1Q9P281 2608 aa19.99■□□□□ 0.79
COL9A3-210ENST00000472880 LOC400499M0QZD8 3231 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 IGSF10Q6WRI0 2623 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 CPED1A4D0V7 1026 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 TOR1BO14657 336 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 TPP1O14773 563 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 USP12O75317 370 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 MPOP05164 745 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 HTR7P34969 479 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 SUOXP51687 545 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 YPEL5P62699 121 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 GABREP78334 506 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 ELP6Q0PNE2 266 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 CCDC173Q0VFZ6 552 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 NR0B2Q15466 257 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 PRRT3Q5FWE3 981 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 CFAP58Q5T655 872 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 ACAD10Q6JQN1 1059 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 PPP1R2P3Q6NXS1 205 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 GUSBP11Q6P575 273 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 MACC1Q6ZN28 852 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 EFL1Q7Z2Z2 1120 aaKnown RBP19.98■□□□□ 0.79
COL9A3-210ENST00000472880 MCOLN2Q8IZK6 566 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 GLMNQ92990 594 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 FCRL3Q96P31 734 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-210ENST00000472880 SLC13A1Q9BZW2 595 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 LHX3Q9UBR4 397 aa19.98■□□□□ 0.79
COL9A3-210ENST00000472880 LRRC10BA6NIK2 292 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 INSIG1O15503 277 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 PIGNO95427 931 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 TIMP2P16035 220 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 ITIH2P19823 946 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 PCBP4P57723 403 aaKnown RBP19.97■□□□□ 0.79
COL9A3-210ENST00000472880 GRM3Q14832 879 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 KLHL40Q2TBA0 621 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 APTXQ7Z2E3 356 aaKnown RBP19.97■□□□□ 0.79
COL9A3-210ENST00000472880 DNAAF5Q86Y56 855 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 LSMEM2Q8N112 164 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 AOPEPQ8N6M6 819 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 TP53I13Q8NBR0 393 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-210ENST00000472880 TBATAQ96M53 351 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 ZNF578Q96N58 590 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-210ENST00000472880 LGMNQ99538 433 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 LRRC61Q9BV99 259 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 CPEB1Q9BZB8 566 aaKnown RBP19.97■□□□□ 0.79
COL9A3-210ENST00000472880 TCEAL2Q9H3H9 227 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-210ENST00000472880 PRORYQ9H606 182 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 AP4E1Q9UPM8 1137 aa19.97■□□□□ 0.79
COL9A3-210ENST00000472880 ANXA6P08133 673 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 EIF4A3P38919 411 aaKnown RBP19.96■□□□□ 0.79
COL9A3-210ENST00000472880 RPIAP49247 311 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 OGDHQ02218 1023 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 C1orf61Q13536 156 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 NCAPHQ15003 741 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 IRF4Q15306 451 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 CYTH1Q15438 398 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 FAXCQ5TGI0 409 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 ZNF248Q8NDW4 579 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 MBNL1Q9NR56 388 aaKnown RBP19.96■□□□□ 0.79
COL9A3-210ENST00000472880 GPATCH2LQ9NWQ4 482 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 RAI2Q9Y5P3 530 aa19.96■□□□□ 0.79
COL9A3-210ENST00000472880 EME2A4GXA9 379 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-210ENST00000472880 LMO7DNF2Z398 122 aa19.95■□□□□ 0.78
COL9A3-210ENST00000472880 MUSKO15146 869 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms