RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 GLRA2P23416 452 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 DDX6P26196 483 aaKnown RBP eCLIP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 SLC5A2P31639 672 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 ACSL1P33121 698 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 HSPA4P34932 840 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 MATR3P43243 847 aaKnown RBP eCLIP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 JAK3P52333 1124 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 NAPAP54920 295 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 HNRNPH2P55795 449 aaKnown RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 SLC8A3P57103 927 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 BPIFB3P59826 476 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 TUBA4AP68366 448 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 PHEXP78562 749 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 BASP1P80723 227 aaKnown RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 PPIDQ08752 370 aaKnown RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 GPS2Q13227 327 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 PDE1CQ14123 709 aaPredicted RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 VEPH1Q14D04 833 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 NR0B2Q15466 257 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 TAF12Q16514 161 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 HLA-DQA1Q5Y7H0 255 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 NUGGCQ68CJ6 796 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 FIP1L1Q6UN15 594 aaKnown RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 MPZL3Q6UWV2 235 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 B3GNT9Q6UX72 402 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 CYP2R1Q6VVX0 501 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 SPNS3Q6ZMD2 512 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 TMC6Q7Z403 805 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 XYLT1Q86Y38 959 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 JAMLQ86YT9 394 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 CCDC170Q8IYT3 715 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 ARHGEF39Q8N4T4 335 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 LINC00469Q8N7U9 141 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 NSUN7Q8NE18 718 aaKnown RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 FAM168AQ92567 244 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 SLC5A5Q92911 643 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 ARRDC3Q96B67 414 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 BIRC7Q96CA5 298 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 GABRG3Q99928 467 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 JPH2Q9BR39 696 aaPredicted RBP4.55□□□□□ -1.68
LMNB1-205ENST00000472034 TEKT3Q9BXF9 490 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 TRIM5Q9C035 493 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 KRT23Q9C075 422 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 ADNPQ9H2P0 1102 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 EBF2Q9HAK2 575 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 ST7Q9NRC1 585 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 RGL1Q9NZL6 768 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 TBK1Q9UHD2 729 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 VPS4AQ9UN37 437 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 ENTPD2Q9Y5L3 495 aa4.55□□□□□ -1.68
LMNB1-205ENST00000472034 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TRBV23OR9-2A0A075B6M9 112 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SYNJ2BP-COX16A0A087WUM0 186 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TRAV19A0A0A6YYK7 116 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SMCO2A6NFE2 343 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TTC34A8MYJ7 566 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 LEFTY2O00292 366 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 MUSKO15146 869 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 VILLO15195 856 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 AHCYL1O43865 530 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 PSMD10O75832 226 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 FESP07332 822 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 GLI1P08151 1106 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 THEGLP0DJG4 465 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 HGFP14210 728 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 FERP16591 822 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TGM2P21980 687 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 MCM3P25205 808 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 MARCKSP29966 332 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SFNP31947 248 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 EIF2DP41214 584 aaKnown RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SEPHS1P49903 392 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 GUCY2FP51841 1108 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 C21orf59P57076 290 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ANTXR2P58335 489 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 OSTNP61366 133 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ZBED6P86452 979 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 E2F1Q01094 437 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TRAP1Q12931 704 aaKnown RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 MPP3Q13368 585 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SPCS2Q15005 226 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 PCBP1Q15365 356 aaKnown RBP eCLIP4.54□□□□□ -1.681e-18■□□□□ 8.3
LMNB1-205ENST00000472034 DDR2Q16832 855 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SLC39A12Q504Y0 691 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 LY6G5CQ5SRR4 150 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CCDC183Q5T5S1 534 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ZCCHC8Q6NZY4 707 aaKnown RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CFAP161Q6P656 301 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ZNF449Q6P9G9 518 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 BORAQ6PGQ7 559 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CRTC1Q6UUV9 634 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 CEP128Q6ZU80 1094 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TRMT11Q7Z4G4 463 aaKnown RBP4.54□□□□□ -1.68
LMNB1-205ENST00000472034 LRRTM3Q86VH5 581 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 JAZF1Q86VZ6 243 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ZNF276Q8N554 614 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 ESX1Q8N693 406 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 TERB1Q8NA31 727 aa4.54□□□□□ -1.68
LMNB1-205ENST00000472034 SPERTQ8NA61 448 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms