RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 LRRC4CQ9HCJ2 640 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 KLHL8Q9P2G9 620 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 HECAQ9UBI9 543 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 SERGEFQ9UGK8 458 aa9.99□□□□□ -0.81
SF3A1-207ENST00000471342 TPX2Q9ULW0 747 aaKnown RBP9.99□□□□□ -0.81
SF3A1-207ENST00000471342 FAM170BA6NMN3 283 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 PLK4O00444 970 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 MAN2B1O00754 1011 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 GAPDHSO14556 408 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 AREL1O15033 823 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 LEFTY1O75610 366 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 KLF8O95600 359 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 LHCGRP22888 699 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 ARNTP27540 789 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 NTSR1P30989 418 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 SLC8A1P32418 973 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 HSPA9P38646 679 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 SCNN1BP51168 640 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RHOAP61586 193 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RPS14P62263 151 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 LMNB2Q03252 620 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 GRSF1Q12849 480 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RALGDSQ12967 914 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 SLC1A5Q15758 541 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 ARSIQ5FYB1 569 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RALGPS1Q5JS13 557 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 SIRPB2Q5JXA9 342 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 TEX35Q5T0J7 233 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 IZUMO3Q5VZ72 239 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 C8orf74Q6P047 294 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 ZNF852Q6ZMS4 543 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RFLNAQ6ZTI6 216 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 MAATS1Q7Z4T9 603 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RELL1Q8IUW5 271 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 GSPT2Q8IYD1 628 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 TTC30BQ8N4P2 665 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 CCDC89Q8N998 374 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 EIF1ADQ8N9N8 165 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 TMIEQ8NEW7 156 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 PJA1Q8NG27 643 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RPLP0P6Q8NHW5 317 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 CCDC26Q8TAB7 109 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 FEM1CQ96JP0 617 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 CCDC114Q96M63 670 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 SERPINB12Q96P63 405 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 LYSMD1Q96S90 227 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 APOL2Q9BQE5 337 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 CINPQ9BW66 212 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 TRIM31Q9BZY9 425 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 VPS45Q9NRW7 570 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 PIH1D1Q9NWS0 290 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RSPH14Q9UHP6 348 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 FEZ2Q9UHY8 353 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 MMP17Q9ULZ9 603 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 NDRG2Q9UN36 371 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 CHKBQ9Y259 395 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 RAI2Q9Y5P3 530 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 CKAP5Q14008 2032 aa9.98□□□□□ -0.81
SF3A1-207ENST00000471342 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
SF3A1-207ENST00000471342 MROH6A6NGR9 719 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 NPC1O15118 1278 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 LDB2O43679 373 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 PMPCBO75439 489 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 POP4O95707 220 aaKnown RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 GABRG2P18507 467 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 FDFT1P37268 417 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 RPS9P46781 194 aaKnown RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 GEMIN4P57678 1058 aaKnown RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 GPX6P59796 221 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 AP1S1P61966 158 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 SATB1Q01826 763 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 SIGLEC14Q08ET2 396 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 MPP3Q13368 585 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 MTM1Q13496 603 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 MORF4L2Q15014 288 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 ELF2Q15723 593 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 CRY1Q16526 586 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 FBXO43Q4G163 708 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 CERCAMQ5T4B2 595 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 PIP5KL1Q5T9C9 394 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 LRRC8BQ6P9F7 803 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 C4orf22Q6V702 233 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 PARS2Q7L3T8 475 aaKnown RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 SYT13Q7L8C5 426 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 HOOK3Q86VS8 718 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 RASSF3Q86WH2 238 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 PPIL6Q8IXY8 311 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 ZCCHC9Q8N567 271 aaKnown RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 OR52K1Q8NGK4 314 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 AENQ8WTP8 325 aaKnown RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 GRK7Q8WTQ7 553 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 ERLEC1Q96DZ1 483 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 SNF8Q96H20 258 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 MRGPRX1Q96LB2 322 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 FCRL3Q96P31 734 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 TUBGCP5Q96RT8 1024 aa9.97□□□□□ -0.81
SF3A1-207ENST00000471342 UHRF1Q96T88 793 aaPredicted RBP9.97□□□□□ -0.81
SF3A1-207ENST00000471342 HEPHQ9BQS7 1158 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms