RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PI15O43692 258 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 USP12O75317 370 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 FAM155BO75949 473 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 USP1O94782 785 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 SNRPAP09012 282 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 CREB1P16220 341 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 GNA12Q03113 381 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 RUNX3Q13761 415 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 TMCO4Q5TGY1 634 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 ZNF783Q6ZMS7 281 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 TMEM135Q86UB9 458 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 CIR1Q86X95 450 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 BBS7Q8IWZ6 715 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 CFAP52Q8N1V2 620 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 DYDC1Q8WWB3 177 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 MYEOVQ96EZ4 313 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 PPANQ9NQ55 473 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 UBP1Q9NZI7 540 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 LSM7Q9UK45 103 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 RPS6KL1Q9Y6S9 549 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 NUP205Q92621 2012 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 TYW5A2RUC4 315 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 PRR33A8MZF0 331 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 ADRA1AP35348 466 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 CRADDP78560 199 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 MGAT5Q09328 741 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 LBRQ14739 615 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 UBXN2BQ14CS0 331 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 EML3Q32P44 896 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 ITPRIPL2Q3MIP1 535 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 TRMT10BQ6PF06 316 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 SPATA22Q8NHS9 363 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 MZB1Q8WU39 189 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 PTCD2Q8WV60 388 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 IMP4Q96G21 291 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 FSD1LQ9BXM9 530 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 NT5MQ9NPB1 228 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 NDRG2Q9UN36 371 aaKnown RBP17.69■□□□□ 0.42
HSPG2-208ENST00000471322 SOX13Q9UN79 622 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 TBC1D30Q9Y2I9 924 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 FAM169AQ9Y6X4 670 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 USP34Q70CQ2 3546 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 SHISA7A6NL88 538 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 KRT4P19013 534 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 RPS24P62847 133 aaKnown RBP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 SLC10A7Q0GE19 358 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 DNAJC3Q13217 504 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 RFTN1Q14699 578 aaPredicted RBP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 PCID2Q5JVF3 399 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 CWF19L1Q69YN2 538 aaKnown RBP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 TXNDC11Q6PKC3 985 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 MARK2Q7KZI7 788 aaKnown RBP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 IPMKQ8NFU5 416 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 ZNF419Q96HQ0 510 aaPredicted RBP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 ECT2Q9H8V3 914 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 TRPV5Q9NQA5 729 aa17.68■□□□□ 0.42
HSPG2-208ENST00000471322 PIH1D1Q9NWS0 290 aaKnown RBP17.68■□□□□ 0.42
HSPG2-208ENST00000471322 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 A0A1W2PPM1 405 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 FOXO6A8MYZ6 492 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 SPECC1L-ADORA2AF8WAN1 911 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 NDUFAB1O14561 156 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 KDELR3O43731 214 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 GREM1O60565 184 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 PIAS1O75925 651 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ZWINTO95229 277 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 FAM107AO95990 144 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 MT-CYBP00156 380 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 DCNP07585 359 aaKnown RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 RHOCP08134 193 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 TCF3P15923 654 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ACVRL1P37023 503 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 IL9RQ01113 521 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ITKQ08881 620 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 PDGFRLQ15198 375 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ZSCAN26Q16670 478 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ANKRD20A4Q4UJ75 823 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 CERCAMQ5T4B2 595 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 IL31Q6EBC2 164 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 RANBP10Q6VN20 620 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ADGRG2Q8IZP9 1017 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 FBXL6Q8N531 539 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ANKRD42Q8N9B4 389 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 HJURPQ8NCD3 748 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 ATP2A3Q93084 1043 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 BHMTQ93088 406 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 CHMP6Q96FZ7 201 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 PRICKLE1Q96MT3 831 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 CCT8L2Q96SF2 557 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 FICDQ9BVA6 458 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 KIFC1Q9BW19 673 aa17.67■□□□□ 0.42
HSPG2-208ENST00000471322 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
HSPG2-208ENST00000471322 E2F8A0AVK6 867 aa17.66■□□□□ 0.42
HSPG2-208ENST00000471322 ATP9BO43861 1147 aa17.66■□□□□ 0.42
HSPG2-208ENST00000471322 TYROBPO43914 113 aa17.66■□□□□ 0.42
HSPG2-208ENST00000471322 PMPCBO75439 489 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms