RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CBSP35520 551 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 CLCN5P51795 746 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 VAMP2P63027 116 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 ADORA2A-AS1P86434 159 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 TRPC3Q13507 836 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 TDGQ13569 410 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 CTTNQ14247 550 aaKnown RBP4.11□□□□□ -1.75
BRCA2-202ENST00000470094 HLFQ16534 295 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 PRAMEF19Q5SWL8 479 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 SLC22A25Q6T423 547 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 FAM160B2Q86V87 743 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 MB21D2Q8IYB1 491 aaPredicted RBP4.11□□□□□ -1.75
BRCA2-202ENST00000470094 FAM216AQ8WUB2 273 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 NUDCD2Q8WVJ2 157 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 ELP4Q96EB1 424 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 TXNDC15Q96J42 360 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 NAP1L4Q99733 375 aaKnown RBP4.11□□□□□ -1.75
BRCA2-202ENST00000470094 TM6SF1Q9BZW5 370 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 INTS2Q9H0H0 1204 aaKnown RBP4.11□□□□□ -1.75
BRCA2-202ENST00000470094 BABAM1Q9NWV8 329 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 TMEM160Q9NX00 188 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 WWOXQ9NZC7 414 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 PEMTQ9UBM1 199 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 NDRG3Q9UGV2 375 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 ADGRF5Q8IZF2 1346 aa4.11□□□□□ -1.75
BRCA2-202ENST00000470094 A0A1B0GVM2 712 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 CBY3A6NI87 242 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 C4orf47A7E2U8 309 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 NCAM2O15394 837 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 PAPSS2O95340 614 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 SLC2A4P14672 509 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 HDAC4P56524 1084 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 DSCR9P59020 149 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 ASIC2Q16515 512 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 ALFQ53S48 1182 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 EFHC1Q5JVL4 640 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 NAA35Q5VZE5 725 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 ZNF324BQ6AW86 544 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 TYW3Q6IPR3 259 aaKnown RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 CRELD2Q6UXH1 353 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 TBC1D26Q86UD7 250 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 SFTPA2Q8IWL1 248 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 CCDC105Q8IYK2 499 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 CLK4Q9HAZ1 481 aaKnown RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 CD93Q9NPY3 652 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 BEX4Q9NWD9 120 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 AGO1Q9UL18 857 aaKnown RBP4.1□□□□□ -1.75
BRCA2-202ENST00000470094 GTF2A1LQ9UNN4 478 aa4.1□□□□□ -1.75
BRCA2-202ENST00000470094 LINC01553A4QN01 128 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CLEC18AA5D8T8 446 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 TEX22C9J3V5 150 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 WDHD1O75717 1129 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 HNRNPA1P09651 372 aaKnown RBP eCLIP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 FGF3P11487 239 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 FCGR1AP12314 374 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 SRD5A1P18405 259 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CD53P19397 219 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 POU1F1P28069 291 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 RYKP34925 604 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 RPL3P39023 403 aaKnown RBP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 MXI1P50539 228 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CDH15P55291 814 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 EFNB1P98172 346 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CYP4A11Q02928 519 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 KEAP1Q14145 624 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 ZNF766Q5HY98 468 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 ZNF667Q5HYK9 610 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 SERTAD4-AS1Q5TG53 156 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 NADSYN1Q6IA69 706 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 KLHL24Q6TFL4 600 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 TADA2BQ86TJ2 420 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CLIP4Q8N3C7 705 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CLEC18CQ8NCF0 446 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 TRIB2Q92519 343 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 ZC3HAV1LQ96H79 300 aaKnown RBP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 SLC25A33Q9BSK2 321 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 TTYH1Q9H313 450 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 SNTG1Q9NSN8 517 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 SAGE1Q9NXZ1 904 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 HCN3Q9P1Z3 774 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 KIAA1456Q9P272 454 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 TBX20Q9UMR3 447 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 SLC45A1Q9Y2W3 748 aa4.09□□□□□ -1.75
BRCA2-202ENST00000470094 LRRFIP2Q9Y608 721 aaKnown RBP4.09□□□□□ -1.75
BRCA2-202ENST00000470094 CCDC196A0A1B0GTZ2 297 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 DYTNA2CJ06 578 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 GAGE10A6NGK3 116 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 HSPB2A8KAH6 182 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 ACOT8O14734 319 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 TIMM23O14925 209 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 HOXC11O43248 304 aaPredicted RBP4.08□□□□□ -1.76
BRCA2-202ENST00000470094 MTA2O94776 668 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 RGS11O94810 467 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 URODP06132 367 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 ITGB8P26012 769 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 FMO4P31512 558 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 NR1H2P55055 460 aa4.08□□□□□ -1.76
BRCA2-202ENST00000470094 SEC61A1P61619 476 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms