RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 Q9Y3F1 56 aa13.79□□□□□ -0.2
BRCA1-209ENST00000470026 TMEM233B4DJY2 109 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TRIM38O00635 465 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 HLA-DQB2P05538 268 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 ENO3P13929 434 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PAMP19021 973 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 INHBCP55103 352 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PPP2R5DQ14738 602 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 AP1ARQ63HQ0 302 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 NXNQ6DKJ4 435 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TIGD7Q6NT04 549 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 RWDD4Q6NW29 188 aaKnown RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TAF2Q6P1X5 1199 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 GALNT7Q86SF2 657 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 LRRC49Q8IUZ0 686 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 SPPL2BQ8TCT7 592 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TOP1MTQ969P6 601 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 ELMO2Q96JJ3 720 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TRPV6Q9H1D0 765 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 CATSPERBQ9H7T0 1116 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 MEAF6Q9HAF1 191 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 ATP13A1Q9HD20 1204 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 SUCOQ9UBS9 1254 aaKnown RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PCDHGA7Q9Y5G6 932 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 WASH4PA8MWX3 477 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 STX16-NPEPL1H3BU86 382 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TXNDC9O14530 226 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 RTN3O95197 1032 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 TFAP2AP05549 437 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 C8BP07358 591 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 CPB1P15086 417 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 HSPA13P48723 471 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 SH3BGRP55822 239 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 BTBD8Q5XKL5 378 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 RNF34Q969K3 372 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 ASB9Q96DX5 294 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 DUS3LQ96G46 650 aaKnown RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 RANBP9Q96S59 729 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PARK7Q99497 189 aaKnown RBP13.78□□□□□ -0.2
BRCA1-209ENST00000470026 PKP2Q99959 881 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 SLC2A11Q9BYW1 496 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 VCX3AQ9NNX9 186 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
BRCA1-209ENST00000470026 NLRC5Q86WI3 1866 aa13.77□□□□□ -0.2
BRCA1-209ENST00000470026 H0YJX3 145 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 PAGE1O75459 146 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 MYL3P08590 195 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 BDNFP23560 247 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 PMLP29590 882 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 RPL5P46777 297 aaKnown RBP13.77□□□□□ -0.21
BRCA1-209ENST00000470026 MRPS6P82932 125 aaKnown RBP13.77□□□□□ -0.21
BRCA1-209ENST00000470026 LRP8Q14114 963 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF470Q6ECI4 717 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 NEPROQ6NW34 567 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 KDELC1Q6UW63 502 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 AGMOQ6ZNB7 445 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 MRPL10Q7Z7H8 261 aaKnown RBP13.77□□□□□ -0.21
BRCA1-209ENST00000470026 SPATA6LQ8N4H0 392 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 FATE1Q969F0 183 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 MARK4Q96L34 752 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 NPAS2Q99743 824 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 SMOC2Q9H3U7 446 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 COPS7BQ9H9Q2 264 aaPredicted RBP13.77□□□□□ -0.21
BRCA1-209ENST00000470026 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.21
BRCA1-209ENST00000470026 TBC1D13Q9NVG8 400 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 TMLHEQ9NVH6 421 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 HACD3Q9P035 362 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 FNIP2Q9P278 1114 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 AP4B1Q9Y6B7 739 aa13.77□□□□□ -0.21
BRCA1-209ENST00000470026 ARL5CA6NH57 179 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 TRIM24O15164 1050 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 CFLARO15519 480 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 PEX11BO96011 259 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 LEPRP48357 1165 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 CLCN5P51795 746 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 MAP2K5Q13163 448 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 SQLEQ14534 574 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 C8orf82Q6P1X6 216 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 SATL1Q86VE3 508 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 UBXN10Q96LJ8 280 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 OLFM1Q99784 485 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 PAAF1Q9BRP4 392 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 UNC93B1Q9H1C4 597 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 NDFIP2Q9NV92 336 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 RBM22Q9NW64 420 aaKnown RBP eCLIP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 NEMP2A6NFY4 417 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 A8MT66 165 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms