RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SLC6A18Q96N87 628 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 HDAC8Q9BY41 377 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 DHX35Q9H5Z1 703 aaKnown RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 WDR70Q9NW82 654 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 GPATCH2LQ9NWQ4 482 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PCSK1NQ9UHG2 260 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PCDHGB2Q9Y5G2 931 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 ACTL7AQ9Y615 435 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 RASA4BC9J798 803 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 EEF2KO00418 725 aaKnown RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 RASA4O43374 803 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 LEFTY1O75610 366 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 ITGB7P26010 798 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 DNA2P51530 1060 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 TAS2R38P59533 333 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 SNRPD1P62314 119 aaKnown RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 RPS6KA1Q15418 735 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 CA9Q16790 459 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 INO80DQ53TQ3 878 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 NEK5Q6P3R8 708 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 ERN2Q76MJ5 926 aaKnown RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 ADAT2Q7Z6V5 191 aaKnown RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 GRIN3AQ8TCU5 1115 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 HMCESQ96FZ2 354 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 KCTD15Q96SI1 283 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 THAP2Q9H0W7 228 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 HECAQ9UBI9 543 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-203ENST00000468565 DMTF1Q9Y222 760 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 SNX11Q9Y5W9 270 aa14.69□□□□□ -0.06
COL27A1-203ENST00000468565 RNF103O00237 685 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 PMLP29590 882 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 CTSKP43235 329 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 NDST2P52849 883 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 C21orf59P57076 290 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 SERINC3Q13530 473 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 PIGHQ14442 188 aaPredicted RBP14.68□□□□□ -0.06
COL27A1-203ENST00000468565 SLC45A4Q5BKX6 768 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 NAPEPLDQ6IQ20 393 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 ZNF354CQ86Y25 554 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 NIPA2Q8N8Q9 360 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 OR2AP1Q8NGE2 309 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 LRRC1Q9BTT6 524 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 TM6SF2Q9BZW4 377 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 LRRC19Q9H756 370 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 TM7SF3Q9NS93 570 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 FNDC3AQ9Y2H6 1198 aaKnown RBP14.68□□□□□ -0.06
COL27A1-203ENST00000468565 A0A1W2PR77 199 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 CYP1A2P05177 515 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 CD38P28907 300 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 HCAR3P49019 387 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 NEK3P51956 506 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 ZNF423Q2M1K9 1284 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 SETMARQ53H47 684 aaPredicted RBP14.68□□□□□ -0.06
COL27A1-203ENST00000468565 C8orf74Q6P047 294 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 LAYNQ6UX15 382 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 DBX2Q6ZNG2 339 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 RFX8Q6ZV50 586 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 SYCE1Q8N0S2 351 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 SERAC1Q96JX3 654 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 PBKQ96KB5 322 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 IL21RQ9HBE5 538 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 MED4Q9NPJ6 270 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 AASDHPPTQ9NRN7 309 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 IP6K2Q9UHH9 426 aa14.68□□□□□ -0.06
COL27A1-203ENST00000468565 H3BQF6 201 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 DFNA5O60443 496 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 RNGTTO60942 597 aaKnown RBP14.67□□□□□ -0.06
COL27A1-203ENST00000468565 TMCC1O94876 653 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 WNT1P04628 370 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 BOLA3Q53S33 107 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 NAXDQ8IW45 347 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 NUP85Q9BW27 656 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 OSBPL1AQ9BXW6 950 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 KLC2Q9H0B6 622 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 ZDHHC6Q9H6R6 413 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 SHROOM3Q8TF72 1996 aa14.67□□□□□ -0.06
COL27A1-203ENST00000468565 ARHGAP42A6NI28 874 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 DAPK3O43293 454 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 SH3BP5O60239 455 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 POP4O95707 220 aaKnown RBP14.66□□□□□ -0.06
COL27A1-203ENST00000468565 ADRB3P13945 408 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 CCT8P50990 548 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 SHC2P98077 582 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 DPYSL2Q16555 572 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 MYLK3Q32MK0 819 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 PPP6R3Q5H9R7 873 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-203ENST00000468565 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 IQCHQ86VS3 1027 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 RYBPQ8N488 228 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-203ENST00000468565 TPCN2Q8NHX9 752 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 FAM71BQ8TC56 605 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 VOPP1Q96AW1 172 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 MS4A14Q96JA4 679 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 GDAP1L1Q96MZ0 367 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 PDFQ9HBH1 243 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 SMARCAL1Q9NZC9 954 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 ANAPC7Q9UJX3 599 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 PRAMEF26H0Y7S4 382 aa14.66□□□□□ -0.06
COL27A1-203ENST00000468565 WNT9AO14904 365 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms