RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 NEK5Q6P3R8 708 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 BRAT1Q6PJG6 821 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 SYT12Q8IV01 421 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 OR14C36Q8NHC7 312 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 NSMCE1Q8WV22 266 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 P3H4Q92791 437 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 RAB7BQ96AH8 199 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 BIRC7Q96CA5 298 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 HAUS1Q96CS2 278 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 KLHL32Q96NJ5 620 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 HEMGNQ9BXL5 484 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 TLR10Q9BXR5 811 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 POLR1EQ9GZS1 481 aaKnown RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 CARD9Q9H257 536 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 ARRDC1-AS1Q9H2J1 176 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 ATP13A3Q9H7F0 1226 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 NOD2Q9HC29 1040 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 NT5MQ9NPB1 228 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 DYRK4Q9NR20 520 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 TMEM74BQ9NUR3 256 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 ATP8A1Q9Y2Q0 1164 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 FADS3Q9Y5Q0 445 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 SLCO1B1Q9Y6L6 691 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.16□□□□□ -0.62
MSH5-212ENST00000467319 MEI4A8MW99 385 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 UPK3BL1B0FP48 263 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 UPK3BL2E5RIL1 263 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 SERPINA4P29622 427 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 MMP12P39900 470 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 SUOXP51687 545 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 MAXP61244 160 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 OTUD4Q01804 1114 aaKnown RBP11.16□□□□□ -0.62
MSH5-212ENST00000467319 CREB5Q02930 508 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 CCDC15Q0P6D6 951 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 WASHC5Q12768 1159 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 TRAF2Q12933 501 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 XRCC4Q13426 336 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 CSRP2Q16527 193 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 WDR45BQ5MNZ6 344 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 CAMK1DQ8IU85 385 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 DCLK2Q8N568 766 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 DEFB119Q8N690 84 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 CCNYQ8ND76 341 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 ARRDC2Q8TBH0 407 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 ACTL9Q8TC94 416 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 TADA1Q96BN2 335 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 SUV39H2Q9H5I1 410 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 CAPN10Q9HC96 672 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 PYCARDQ9ULZ3 195 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 ITM2BQ9Y287 266 aa11.16□□□□□ -0.62
MSH5-212ENST00000467319 GON4LQ3T8J9 2241 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 TCRBV7S2A1N4TA0A589 114 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 TTC24A2A3L6 582 aaPredicted RBP11.15□□□□□ -0.62
MSH5-212ENST00000467319 USP27XA6NNY8 438 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 ZSCAN12O43309 604 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 MTSS1O43312 755 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 TJP3O95049 919 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 JCHAINP01591 159 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 MMP2P08253 660 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 ZNF806P0C7X5 589 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 TIMP2P16035 220 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 PTPN3P26045 913 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 CD27P26842 260 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 NUDT1P36639 197 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 CETN2P41208 172 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SCNN1BP51168 640 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 DSC2Q02487 901 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 BCL2L1Q07817 233 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 NIPAL4Q0D2K0 466 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SPEM2Q0P670 501 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 AP1B1Q10567 949 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 RPS6KA1Q15418 735 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SLC14A2Q15849 920 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 ZNF284Q2VY69 593 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 LRRC73Q5JTD7 316 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SYCP2LQ5T4T6 812 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 FBXL19Q6PCT2 694 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 RABEPKQ7Z6M1 372 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 ZSCAN30Q86W11 494 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 HORMAD1Q86X24 394 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 TFB1MQ8WVM0 346 aaKnown RBP11.15□□□□□ -0.62
MSH5-212ENST00000467319 PIGKQ92643 395 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SEMA3CQ99985 751 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 EBF2Q9HAK2 575 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SCUBE2Q9NQ36 999 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 SEMA4GQ9NTN9 838 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 HAUS2Q9NVX0 235 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 RBM22Q9NW64 420 aaKnown RBP eCLIP11.15□□□□□ -0.62
MSH5-212ENST00000467319 SUSD2Q9UGT4 822 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 GGT7Q9UJ14 662 aa11.15□□□□□ -0.62
MSH5-212ENST00000467319 ZFR2Q9UPR6 939 aaKnown RBP11.15□□□□□ -0.62
MSH5-212ENST00000467319 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
MSH5-212ENST00000467319 A0A1W2PPC4 97 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms