RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 RING1Q06587 406 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 KPNB1Q14974 876 aaKnown RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 SIRPB2Q5JXA9 342 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 RBM20Q5T481 1227 aaKnown RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 TMPRSS6Q8IU80 811 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 OR13J1Q8NGT2 312 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 MAPK15Q8TD08 544 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 STYXQ8WUJ0 223 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 FATE1Q969F0 183 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 TSNARE1Q96NA8 513 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 OMDQ99983 421 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 PRKD2Q9BZL6 878 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 CDH19Q9H159 772 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 STN1Q9H668 368 aaKnown RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 XPR1Q9UBH6 696 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 KCTD3Q9Y597 815 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 ACTL7AQ9Y615 435 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 LAMA2P24043 3122 aaKnown RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 TARM1B6A8C7 271 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 H7C4K7 107 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 ATP5BP06576 529 aaKnown RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 TPBGLP0DKB5 382 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 AOC1P19801 751 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 TACR2P21452 398 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 SLC6A4P31645 630 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 GRIA4P48058 902 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 NAGLUP54802 743 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 IL10RBQ08334 325 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 LBRQ14739 615 aaKnown RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 SLC9B1Q4ZJI4 515 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 LRRC8EQ6NSJ5 796 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 PTAR1Q7Z6K3 402 aaPredicted RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 LGI2Q8N0V4 545 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 POU5F2Q8N7G0 328 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 ZNF296Q8WUU4 475 aaPredicted RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 SEMA3CQ99985 751 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 MEI4A8MW99 385 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 TMEM114B3SHH9 223 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 GJB5O95377 273 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 GNRH1P01148 92 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 APOA4P06727 396 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 MPSTP25325 297 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 OR1D2P34982 312 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 ARSDP51689 593 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 PARP15Q460N3 678 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 EPGNQ6UW88 154 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 LDB1Q86U70 411 aaPredicted RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 TDRD5Q8NAT2 981 aaKnown RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 OR52K2Q8NGK3 314 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 CLPTM1LQ96KA5 538 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 SHCBP1LQ9BZQ2 653 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 UNC93B1Q9H1C4 597 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 RPL26L1Q9UNX3 145 aaKnown RBP11.53□□□□□ -0.56
HPS1-208ENST00000467246 SORCS3Q9UPU3 1222 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 C15orf41Q9Y2V0 281 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 GREB1Q4ZG55 1949 aa11.53□□□□□ -0.56
HPS1-208ENST00000467246 OR51F1A6NGY5 319 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 PITPNM1O00562 1244 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 DLX3O60479 287 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.56
HPS1-208ENST00000467246 NCF2P19878 526 aaPredicted RBP11.52□□□□□ -0.56
HPS1-208ENST00000467246 TBCCQ15814 346 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 ACSBG2Q5FVE4 666 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 LIPMQ5VYY2 423 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 DEFB128Q7Z7B8 93 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 SREK1Q8WXA9 508 aaKnown RBP11.52□□□□□ -0.56
HPS1-208ENST00000467246 TADA1Q96BN2 335 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 SGF29Q96ES7 293 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 PPP1R36Q96LQ0 422 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 OLFM1Q99784 485 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 TMEM175Q9BSA9 504 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 PLA2G4CQ9UP65 541 aa11.52□□□□□ -0.56
HPS1-208ENST00000467246 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 PRAMEF11O60813 436 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 KLHL2O95198 593 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 COL6A2P12110 1019 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 GNAZP19086 355 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 CRABP2P29373 138 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 SMARCB1Q12824 385 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 PTPRCAPQ14761 206 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 ARL13AQ5H913 290 aaPredicted RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 CFAP157Q5JU67 520 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.52□□□□□ -0.572e-7■■■■□ 24.7
HPS1-208ENST00000467246 PHTF2Q8N3S3 785 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 ENDOVQ8N8Q3 282 aaKnown RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 RDH11Q8TC12 318 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 ZNF512Q96ME7 567 aaPredicted RBP11.52□□□□□ -0.57
HPS1-208ENST00000467246 FAM161BQ96MY7 647 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 OR52B2Q96RD2 323 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 RANBP9Q96S59 729 aa11.52□□□□□ -0.57
HPS1-208ENST00000467246 THTPAQ9BU02 230 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms