RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PTGR1Q14914 329 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 DUSP6Q16828 381 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 ZNF667Q5HYK9 610 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 SERTAD4-AS1Q5TG53 156 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 CAPRIN2Q6IMN6 1127 aaKnown RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 TMEM71Q6P5X7 295 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 SLC16A12Q6ZSM3 486 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 H1FNTQ75WM6 255 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 TADA2BQ86TJ2 420 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 FAM160B2Q86V87 743 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 RBFAQ8N0V3 343 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 PLD5Q8N7P1 536 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 MCPH1Q8NEM0 835 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 GABPB2Q8TAK5 448 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 ATOH1Q92858 354 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 SLC25A28Q96A46 364 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 MEIS3Q99687 375 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 TTYH1Q9H313 450 aaPredicted RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 WDR6Q9NNW5 1121 aaKnown RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 SPATS2LQ9NUQ6 558 aaKnown RBP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 BABAM1Q9NWV8 329 aa4.51□□□□□ -1.69
LRCH3-211ENST00000466054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
LRCH3-211ENST00000466054 ADGRF5Q8IZF2 1346 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 MBD4O95243 580 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 FMO4P31512 558 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 ABCD1P33897 745 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 FOXD4Q12950 439 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-211ENST00000466054 TAF11Q15544 211 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 PRTGQ2VWP7 1150 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 SLC4A8Q2Y0W8 1093 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 PLEKHO1Q53GL0 409 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-211ENST00000466054 DSTYKQ6XUX3 929 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 PELI3Q8N2H9 469 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 TEX45Q8NA69 505 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 ENGASEQ8NFI3 743 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 CEP76Q8TAP6 659 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 SLC35F5Q8WV83 523 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 INPP5DQ92835 1189 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 RNF183Q96D59 192 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 KIF1BPQ96EK5 621 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 SAAL1Q96ER3 474 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 C7orf26Q96N11 449 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 MAF1Q9H063 256 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 ISCUQ9H1K1 167 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 PDCL3Q9H2J4 239 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 ZHX3Q9H4I2 956 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 KRCC1Q9NPI7 259 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-211ENST00000466054 SIRT3Q9NTG7 399 aaPredicted RBP4.5□□□□□ -1.69
LRCH3-211ENST00000466054 TAS2R10Q9NYW0 307 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 SARDHQ9UL12 918 aa4.5□□□□□ -1.69
LRCH3-211ENST00000466054 KDM3AQ9Y4C1 1321 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TEX13CA0A0J9YWL9 993 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 A0A1W2PPH5 198 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 A0A1W2PQM1 296 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TAF4O00268 1085 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 SPTLC2O15270 562 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TNFSF14O43557 240 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 CLDN7O95471 211 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 GALTP07902 379 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 NGFRP08138 427 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 PCNAP12004 261 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 SLC2A4P14672 509 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 ARSBP15848 533 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 POU1F1P28069 291 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 EPHA8P29322 1005 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TTKP33981 857 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 RYKP34925 604 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 CDH12P55289 794 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 SELENOVP59797 346 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 DCAF6Q58WW2 860 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 WASHC2DQ5SRD0 308 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 NUGGCQ68CJ6 796 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 FAAH2Q6GMR7 532 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 MOB3CQ70IA8 216 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 RSRC2Q7L4I2 434 aaKnown RBP4.49□□□□□ -1.69
LRCH3-211ENST00000466054 PATL1Q86TB9 770 aaKnown RBP4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TMPRSS12Q86WS5 348 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 CADM3Q8N126 398 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TMEM199Q8N511 208 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 PPHLN1Q8NEY8 458 aaKnown RBP4.49□□□□□ -1.69
LRCH3-211ENST00000466054 OTULINQ96BN8 352 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 KLHL29Q96CT2 875 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 NR1H4Q96RI1 486 aaPredicted RBP4.49□□□□□ -1.69
LRCH3-211ENST00000466054 MPHOSPH8Q99549 860 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 MVB12BQ9H7P6 319 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 SNTG1Q9NSN8 517 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 IRAK4Q9NWZ3 460 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 HSPB7Q9UBY9 170 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 RAI2Q9Y5P3 530 aa4.49□□□□□ -1.69
LRCH3-211ENST00000466054 TTC36A6NLP5 189 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 F5H0A9 414 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 SLC25A17O43808 307 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 TACC1O75410 805 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 RTN3O95197 1032 aaPredicted RBP4.48□□□□□ -1.69
LRCH3-211ENST00000466054 CD4P01730 458 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 HEXAP06865 529 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 IRF1P10914 325 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 GABRB2P47870 512 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 PPP3CCP48454 512 aa4.48□□□□□ -1.69
LRCH3-211ENST00000466054 EIF3BP55884 814 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms