RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 LPIN1Q14693 890 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 TAF11Q15544 211 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 TBCEQ15813 527 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CCNG2Q16589 344 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 GSTA3Q16772 222 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 HIST2H2ACQ16777 129 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SOWAHAQ2M3V2 549 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 EDRF1Q3B7T1 1238 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SOWAHCQ53LP3 525 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SGO1Q5FBB7 561 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 EPHA10Q5JZY3 1008 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CCDC30Q5VVM6 783 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ZKSCAN2Q63HK3 967 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 NUGGCQ68CJ6 796 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ZNF425Q6IV72 752 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 HEPHL1Q6MZM0 1159 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 HMBOX1Q6NT76 420 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CDC73Q6P1J9 531 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 PARM1Q6UWI2 310 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ATF7IPQ6VMQ6 1270 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 B4GALNT4Q76KP1 1039 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 RRM2BQ7LG56 351 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC46A3Q7Z3Q1 461 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 MRPL10Q7Z7H8 261 aaKnown RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 FAM217AQ8IXS0 508 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CCDC105Q8IYK2 499 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 DPP10Q8N608 796 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 LRRC57Q8N9N7 239 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CLEC18CQ8NCF0 446 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ZNF548Q8NEK5 533 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 GABPB2Q8TAK5 448 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ETNPPLQ8TBG4 499 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 KCNG4Q8TDN1 519 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ATOH1Q92858 354 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 RPL36ALQ969Q0 106 aaKnown RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 KLHL29Q96CT2 875 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 RNF183Q96D59 192 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 URB1-AS1Q96HZ7 61 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 PPP1R13BQ96KQ4 1090 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 YME1L1Q96TA2 773 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 PIP5K1AQ99755 562 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ITPAQ9BY32 194 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CDT1Q9H211 546 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 PDCL3Q9H2J4 239 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 PRKRIP1Q9H875 184 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 PLEKHA5Q9HAU0 1116 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SCPEP1Q9HB40 452 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 NRIP3Q9NQ35 241 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SIRT3Q9NTG7 399 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SMC4Q9NTJ3 1288 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 DECR2Q9NUI1 292 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ANKRD10Q9NXR5 420 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 ORC3Q9UBD5 711 aaPredicted RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 NDRG3Q9UGV2 375 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 INTS6Q9UL03 887 aaKnown RBP2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 COG5Q9UP83 839 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC45A1Q9Y2W3 748 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 NFE2L3Q9Y4A8 694 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 CAPN7Q9Y6W3 813 aa2.01□□□□□ -2.09
NUCKS1-202ENST00000464938 IGLV5-39A0A0G2JS06 123 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 TMEM272A0A1B0GTI8 110 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 LIPT2A6NK58 231 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 HSPB2A8KAH6 182 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 I6L893 689 aaPredicted RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 CHL1O00533 1208 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 WNT9BO14905 357 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 SEC14L5O43304 696 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 LDB2O43679 373 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 LIASO43766 372 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 SLC25A17O43808 307 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 DOK2O60496 412 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 RNASEH2AO75792 299 aaKnown RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 TOMM40O96008 361 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 MT-CYBP00156 380 aaPredicted RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 LCATP04180 440 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 TMEM191BP0C7N4 346 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 HSPA1AP0DMV8 641 aaKnown RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 HSPA1BP0DMV9 641 aaKnown RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 IRF1P10914 325 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 HOXB2P14652 356 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 ARSBP15848 533 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 CDAP32320 146 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 NR4A2P43354 598 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 ABCG1P45844 678 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 RFX5P48382 616 aaPredicted RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 PIP4K2AP48426 406 aaPredicted RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 PPP3CCP48454 512 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 HDAC4P56524 1084 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 ZP1P60852 638 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 OLR1P78380 273 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 MRPS21P82921 87 aaKnown RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 SETQ01105 290 aaPredicted RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 GAD2Q05329 585 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 ST3GAL1Q11201 340 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 TMEM115Q12893 351 aaPredicted RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 TRAF1Q13077 416 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 OLIG2Q13516 323 aa2□□□□□ -2.09
NUCKS1-202ENST00000464938 DCTN2Q13561 401 aaKnown RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 EIF4A2Q14240 407 aaKnown RBP2□□□□□ -2.09
NUCKS1-202ENST00000464938 HSPB2Q16082 182 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms