RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 GGT7Q9UJ14 662 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 ADAMTS9Q9P2N4 1935 aa16.03■□□□□ 0.16
ERCC3-206ENST00000462306 A0A1W2PR77 199 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 TTC24A2A3L6 582 aaPredicted RBP16.02■□□□□ 0.16
ERCC3-206ENST00000462306 APOL1O14791 398 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MATN3O15232 486 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 PCDH8O95206 1070 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 WNT1P04628 370 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MX2P20592 715 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 CCNCP24863 283 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 NUDT1P36639 197 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MMP13P45452 471 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 SCNN1BP51168 640 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 AP1S1P61966 158 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 HNRNPDQ14103 355 aaKnown RBP16.02■□□□□ 0.16
ERCC3-206ENST00000462306 SETMARQ53H47 684 aaPredicted RBP16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MARC1Q5VT66 337 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 NAPEPLDQ6IQ20 393 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 SPOCD1Q6ZMY3 1216 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 TTC7BQ86TV6 843 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MINDY1Q8N5J2 469 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.02■□□□□ 0.16
ERCC3-206ENST00000462306 LRRN4Q8WUT4 740 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 NSMCE1Q8WV22 266 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 SERAC1Q96JX3 654 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MGME1Q9BQP7 344 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 GTPBP2Q9BX10 602 aaKnown RBP16.02■□□□□ 0.16
ERCC3-206ENST00000462306 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
ERCC3-206ENST00000462306 ZDHHC5Q9C0B5 715 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 ATP13A3Q9H7F0 1226 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 DMTF1Q9Y222 760 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
ERCC3-206ENST00000462306 DOCK9Q9BZ29 2069 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 GRID2IPA4D2P6 1211 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 TRAFD1O14545 582 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 VILLO15195 856 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 TSPAN6O43657 245 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 KRT10P13645 584 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ZFXP17010 805 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ITIH2P19823 946 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 CD38P28907 300 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 SERPINA4P29622 427 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 CTNNA1P35221 906 aaKnown RBP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 NAP1L1P55209 391 aaKnown RBP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 KIF5AQ12840 1032 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 FGL2Q14314 439 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 TEAD4Q15561 434 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 KIF19Q2TAC6 998 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ODF2Q5BJF6 829 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 LRRC73Q5JTD7 316 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 KIAA1161Q6NSJ0 714 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 TIGD7Q6NT04 549 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 NPNTQ6UXI9 565 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ZSWIM9Q86XI8 627 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 RFX6Q8HWS3 928 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 RCOR2Q8IZ40 523 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 BBS5Q8N3I7 341 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 TXLNBQ8N3L3 684 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 KIAA1524Q8TCG1 905 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 KLK6Q92876 244 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 HDAC11Q96DB2 347 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ECHDC3Q96DC8 303 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 FEM1CQ96JP0 617 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 OLFM3Q96PB7 478 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 NUDCD1Q96RS6 583 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 AASDHPPTQ9NRN7 309 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 DNAAF2Q9NVR5 837 aaKnown RBP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ANKRD6Q9Y2G4 727 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
ERCC3-206ENST00000462306 PCDHA3Q9Y5H8 950 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 HEY1Q9Y5J3 304 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 ADGRG1Q9Y653 693 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 DCHS1Q96JQ0 3298 aa16.01■□□□□ 0.15
ERCC3-206ENST00000462306 SHROOM3Q8TF72 1996 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 MACROD2A1Z1Q3 448 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 DCDC2BA2VCK2 349 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 SLC31A1O15431 190 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 ARHGAP6O43182 974 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 ZRANB2O95218 330 aaKnown RBP eCLIP16■□□□□ 0.15
ERCC3-206ENST00000462306 PRLRP16471 622 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 CTSKP43235 329 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 SUOXP51687 545 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 ATXN3P54252 364 aaPredicted RBP16■□□□□ 0.15
ERCC3-206ENST00000462306 MAXP61244 160 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 DYNLT1P63172 113 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 RPS21P63220 83 aaKnown RBP16■□□□□ 0.15
ERCC3-206ENST00000462306 BCL2L1Q07817 233 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 ADCY2Q08462 1091 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 PPIDQ08752 370 aaKnown RBP16■□□□□ 0.15
ERCC3-206ENST00000462306 UGP2Q16851 508 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 BRAT1Q6PJG6 821 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 LRRC8AQ8IWT6 810 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 TMEM145Q8NBT3 493 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 EXD1Q8NHP7 514 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 LGMNQ99538 433 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 C1QTNF2Q9BXJ5 285 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 SLC17A9Q9BYT1 436 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 NOD2Q9HC29 1040 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms