RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZNF641Q96N77 438 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SLC6A18Q96N87 628 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 PSKH2Q96QS6 385 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 PCDH15Q96QU1 1955 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 ORAI3Q9BRQ5 295 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 EBF2Q9HAK2 575 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 NT5MQ9NPB1 228 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 DKK3Q9UBP4 350 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 DMTF1Q9Y222 760 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 HEY1Q9Y5J3 304 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 FADS3Q9Y5Q0 445 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 GVINP1Q7Z2Y8 2422 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 DOCK9Q9BZ29 2069 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 TRPM6Q9BX84 2022 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 FRYLO94915 3013 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 A0A1B0GVT2 93 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 MACROD2A1Z1Q3 448 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 C10orf142B7Z368 130 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 PRAMEF26H0Y7S4 382 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 CDX4O14627 284 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SLC31A1O15431 190 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 ARHGAP6O43182 974 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 LATO43561 262 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 TSPAN6O43657 245 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 OPHN1O60890 802 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 ZRANB2O95218 330 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 CER1O95813 267 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 PEX11BO96011 259 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 TIMP2P16035 220 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 CD38P28907 300 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 AKT2P31751 481 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SUOXP51687 545 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 AP1S1P61966 158 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 DYNLT1P63172 113 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 RPS21P63220 83 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SLC10A2Q12908 348 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 HNRNPDQ14103 355 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 STAT4Q14765 748 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 KAZNQ674X7 775 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SLC9A4Q6AI14 798 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 NAPEPLDQ6IQ20 393 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SPOCD1Q6ZMY3 1216 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 CAMK1DQ8IU85 385 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 CCDC13Q8IYE1 715 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 KATNAL2Q8IYT4 538 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 RCOR2Q8IZ40 523 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 MINDY1Q8N5J2 469 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 PLD5Q8N7P1 536 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 CXorf40AQ8TE69 158 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 HDAC11Q96DB2 347 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 TSGA13Q96PP4 275 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 NUDCD1Q96RS6 583 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 DTLQ9NZJ0 730 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 ZFR2Q9UPR6 939 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 SLCO1B1Q9Y6L6 691 aa10.7□□□□□ -0.7
TRAPPC12-213ENST00000461577 TP53BP1Q12888 1972 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 TTC24A2A3L6 582 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 GRID2IPA4D2P6 1211 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 PPP1R12AO14974 1030 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 MUSKO15146 869 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 VILLO15195 856 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 MATN3O15232 486 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 CST8O60676 142 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 MAGEC1O60732 1142 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 KRT10P13645 584 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 PRLRP16471 622 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 HNRNPA2B1P22626 353 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 CTNNA1P35221 906 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 CETN2P41208 172 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 CDKN2BP42772 138 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 MAXP61244 160 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 ELP6Q0PNE2 266 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 AP1B1Q10567 949 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 SGCGQ13326 291 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 PDK1Q15118 436 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 LLGL1Q15334 1064 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 KIF19Q2TAC6 998 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 ZNF284Q2VY69 593 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 TFDP3Q5H9I0 405 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 RALGPS1Q5JS13 557 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 LRRC73Q5JTD7 316 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 SEL1L3Q68CR1 1132 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 ERAP2Q6P179 960 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 BRAT1Q6PJG6 821 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 LAYNQ6UX15 382 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 NPNTQ6UXI9 565 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 BZW1Q7L1Q6 419 aaKnown RBP10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 PGBD5Q8N414 524 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 TEX26Q8N6G2 289 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 OR2I1PQ8NGU4 316 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 EXD1Q8NHP7 514 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 MAML1Q92585 1016 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 KRT35Q92764 455 aa10.69□□□□□ -0.7
TRAPPC12-213ENST00000461577 FATE1Q969F0 183 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms