RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 C8orf58Q8NAV2 365 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 SEMA6DQ8NFY4 1073 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 ZNF398Q8TD17 642 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 HASPINQ8TF76 798 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 TMEM170AQ8WVE7 144 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 NELL1Q92832 810 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 OTULINQ96BN8 352 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 WDFY2Q96P53 400 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 MAP7D2Q96T17 732 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 YME1L1Q96TA2 773 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 MXD3Q9BW11 206 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 RIOX1Q9H6W3 641 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 POLR1BQ9H9Y6 1135 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 WDR6Q9NNW5 1121 aaKnown RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 ASAH2Q9NR71 780 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 SPATS2LQ9NUQ6 558 aaKnown RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 PLEKHB1Q9UF11 243 aaPredicted RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 CHORDC1Q9UHD1 332 aaPredicted RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 SNX8Q9Y5X2 465 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 SESN1Q9Y6P5 492 aa3.32□□□□□ -1.88
VCL-203ENST00000461383 WDR33Q9C0J8 1336 aaKnown RBP3.32□□□□□ -1.88
VCL-203ENST00000461383 ADGRF5Q8IZF2 1346 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 SYNDIG1LA6NDD5 238 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 LRRC3CA6NJW4 275 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 EBAG9O00559 213 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 PAGE4O60829 102 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 NDUFS3O75489 264 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 SLC25A12O75746 678 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 BEST1O76090 585 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 MTA2O94776 668 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 NUDT3O95989 172 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 MT-CYBP00156 380 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 TUBB4AP04350 444 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 MMP3P08254 477 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 UNGP13051 313 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 IL7RP16871 459 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 TMEM11P17152 192 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 CTPS1P17812 591 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 EDN2P20800 178 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 TM4SF1P30408 202 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 CDAP32320 146 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 NNMTP40261 264 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 EIF2DP41214 584 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 ARHGAP25P42331 645 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 PIK3CAP42336 1068 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 PIP4K2AP48426 406 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 F2RL1P55085 397 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 INHBEP58166 350 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 ID2Q02363 134 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 CEBPZQ03701 1054 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 ZNF91Q05481 1191 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 DPTQ07507 201 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 NIPAL4Q0D2K0 466 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 EPS8Q12929 822 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 STK4Q13043 487 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 FGFBP1Q14512 234 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 DRAP1Q14919 205 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 SMN1Q16637 294 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 TCTN1Q2MV58 587 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 COL28A1Q2UY09 1125 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 KIAA1614Q5VZ46 1190 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 TBC1D9BQ66K14 1250 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 TXNDC8Q6A555 127 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 GPR139Q6DWJ6 353 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 LRRC8EQ6NSJ5 796 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 ZNF782Q6ZMW2 699 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 PTF1AQ7RTS3 328 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 CAMK1DQ8IU85 385 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.31□□□□□ -1.88
VCL-203ENST00000461383 DHX40Q8IX18 779 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 FAM217AQ8IXS0 508 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 ADGRF2Q8IZF7 708 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 CADM3Q8N126 398 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 HORMAD2Q8N7B1 307 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 LSMEM1Q8N8F7 131 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 OR4N2Q8NGD1 307 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 PSPC1Q8WXF1 523 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 ZKSCAN4Q969J2 545 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 PABPC5Q96DU9 382 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 MMABQ96EY8 250 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 SAT2Q96F10 170 aaPredicted RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 ZNF333Q96JL9 665 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 C1orf74Q96LT6 269 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 SLF1Q9BQI6 1058 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 STRA6Q9BX79 667 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 LHPPQ9H008 270 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 SCPEP1Q9HB40 452 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 PNRC2Q9NPJ4 139 aaKnown RBP3.31□□□□□ -1.88
VCL-203ENST00000461383 RNF146Q9NTX7 359 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 ADAM18Q9Y3Q7 739 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 DMRT1Q9Y5R6 373 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 SLC4A4Q9Y6R1 1079 aa3.31□□□□□ -1.88
VCL-203ENST00000461383 UTYO14607 1347 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 TRBV5-7A0A0A0MS05 114 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 KIR2DS5A0A0G2JLQ3 304 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 A0A1W2PQ09 198 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 A0A1W2PRG0 241 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 FRMD3A2A2Y4 597 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 CBY3A6NI87 242 aa3.3□□□□□ -1.88
VCL-203ENST00000461383 AGAP14A8MT82 685 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms