RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ADAMTS14Q8WXS8 1223 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FAF2Q96CS3 445 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZNF599Q96NL3 588 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ELF4Q99607 663 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 DESI2Q9BSY9 194 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PREBQ9HCU5 417 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KLHL11Q9NVR0 708 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 HAUS2Q9NVX0 235 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ADGRG1Q9Y653 693 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NUMA1Q14980 2115 aa13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TPRP12270 2363 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ACACBO00763 2458 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SHROOM3Q8TF72 1996 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 H0Y8X5 98 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 J3KR12 359 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TLR4O00206 839 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KCNK3O14649 394 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TNFSF14O43557 240 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RNGTTO60942 597 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IGSF6O95976 241 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ITGAVP06756 1048 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MX2P20592 715 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 DRD3P35462 400 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RENBPP51606 427 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CCNHP51946 323 aaPredicted RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CNTN1Q12860 1018 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 OVGP1Q12889 678 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CYTH1Q15438 398 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MYLK3Q32MK0 819 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 POM121L1PQ3SYA9 428 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NAPEPLDQ6IQ20 393 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 BZW1Q7L1Q6 419 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TRIM69Q86WT6 500 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RFX6Q8HWS3 928 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ATPAF2Q8N5M1 289 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MFSD2AQ8NA29 543 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KDF1Q8NAX2 398 aaPredicted RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CHST14Q8NCH0 376 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RNF25Q96BH1 459 aaPredicted RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 RBM41Q96IZ5 413 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ORAI3Q9BRQ5 295 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PDFQ9HBH1 243 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KLK13Q9UKR3 277 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 AMFRQ9UKV5 643 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SARDHQ9UL12 918 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ACTL7AQ9Y615 435 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SLCO1B1Q9Y6L6 691 aa13.42□□□□□ -0.26
RAB11FIP3-207ENST00000461009 A0A1B0GTQ1 180 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MACROD2A1Z1Q3 448 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GOLGA8CPA6NN73 597 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PRAMEF26H0Y7S4 382 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KRIT1O00522 736 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 APOL1O14791 398 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LATO43561 262 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LEFTY1O75610 366 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PTMAP06454 111 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CCDC175P0C221 793 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MAT2AP31153 395 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NSUN2Q08J23 767 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TFDP2Q14188 446 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 LBRQ14739 615 aaKnown RBP13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NCBP2-AS2Q69YL0 99 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 TIGD7Q6NT04 549 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IQCHQ86VS3 1027 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 KATNAL2Q8IYT4 538 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 EXD1Q8NHP7 514 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FAM131CQ96AQ9 280 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CINPQ9BW66 212 aaPredicted RBP13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 OSBPL1AQ9BXW6 950 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 ERVMER34-1Q9H9K5 563 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 FTSJ1Q9UET6 329 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 SEPT3Q9UH03 358 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MFHAS1Q9Y4C4 1052 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PCDHA3Q9Y5H8 950 aa13.41□□□□□ -0.26
RAB11FIP3-207ENST00000461009 C3orf70A6NLC5 250 aaPredicted RBP13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PLK4O00444 970 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 MAFKO60675 156 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 NEBLO76041 1014 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CTSLP07711 333 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CDK4P11802 303 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CCNCP24863 283 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 HSPA9P38646 679 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GARSP41250 739 aaKnown RBP13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 CSNK1DP48730 415 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 COPS2P61201 443 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PPP2CBP62714 309 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 PPP2CAP67775 309 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 IL9RQ01113 521 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GALNT2Q10471 571 aa13.4□□□□□ -0.26
RAB11FIP3-207ENST00000461009 GSE1Q14687 1217 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms