RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 NAPEPLDQ6IQ20 393 aa17.97■□□□□ 0.47
PLOD3-209ENST00000460475 MFSD7Q6UXD7 560 aa17.97■□□□□ 0.47
PLOD3-209ENST00000460475 NSMCE1Q8WV22 266 aa17.97■□□□□ 0.47
PLOD3-209ENST00000460475 SPOCK2Q92563 424 aa17.97■□□□□ 0.47
PLOD3-209ENST00000460475 MAML1Q92585 1016 aa17.97■□□□□ 0.47
PLOD3-209ENST00000460475 RNF25Q96BH1 459 aaPredicted RBP17.97■□□□□ 0.47
PLOD3-209ENST00000460475 FSCN3Q9NQT6 498 aa17.97■□□□□ 0.47
PLOD3-209ENST00000460475 DNAAF2Q9NVR5 837 aaKnown RBP17.97■□□□□ 0.47
PLOD3-209ENST00000460475 ZFR2Q9UPR6 939 aaKnown RBP17.97■□□□□ 0.47
PLOD3-209ENST00000460475 A0A1W2PR77 199 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 VILLO15195 856 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 MATN3O15232 486 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 GJB3O75712 270 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 PIGNO95427 931 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 TNNT1P13805 278 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 TIMP2P16035 220 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 ZFXP17010 805 aaPredicted RBP17.96■□□□□ 0.47
PLOD3-209ENST00000460475 RPS21P63220 83 aaKnown RBP17.96■□□□□ 0.47
PLOD3-209ENST00000460475 KIF5AQ12840 1032 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 ZNF235Q14590 738 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 ZNF284Q2VY69 593 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 RALGPS1Q5JS13 557 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 KIAA1161Q6NSJ0 714 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 TIGD7Q6NT04 549 aaPredicted RBP17.96■□□□□ 0.47
PLOD3-209ENST00000460475 BRAT1Q6PJG6 821 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 KIAA1328Q86T90 577 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 CAMK1DQ8IU85 385 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 BBS5Q8N3I7 341 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 PGBD5Q8N414 524 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 LRRC57Q8N9N7 239 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 HDAC11Q96DB2 347 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 ECHDC3Q96DC8 303 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 SERAC1Q96JX3 654 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 NSMCE3Q96MG7 304 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 SLC6A18Q96N87 628 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 MGME1Q9BQP7 344 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 DESI2Q9BSY9 194 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 MAK16Q9BXY0 300 aaKnown RBP17.96■□□□□ 0.47
PLOD3-209ENST00000460475 ATP13A3Q9H7F0 1226 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 AMACRQ9UHK6 382 aa17.96■□□□□ 0.47
PLOD3-209ENST00000460475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
PLOD3-209ENST00000460475 TP53BP1Q12888 1972 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 A0A1B0GVT2 93 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 PRAMEF26H0Y7S4 382 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 TRAFD1O14545 582 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 APOL1O14791 398 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 WNT9AO14904 365 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 PCDH8O95206 1070 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ZRANB2O95218 330 aaKnown RBP eCLIP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 CD38P28907 300 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 SERPINA4P29622 427 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 MAT2AP31153 395 aaKnown RBP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 MMP13P45452 471 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 SCNN1BP51168 640 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ATXN3P54252 364 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ODF2Q5BJF6 829 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ALG1LQ6GMV1 187 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 IL27RAQ6UWB1 636 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 TTC7BQ86TV6 843 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 IQCHQ86VS3 1027 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 RCOR2Q8IZ40 523 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 MINDY1Q8N5J2 469 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 EXD1Q8NHP7 514 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 KIAA1524Q8TCG1 905 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ASB12Q8WXK4 309 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 NUDCD1Q96RS6 583 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 C1QTNF2Q9BXJ5 285 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 GRPEL1Q9HAV7 217 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ANKRD6Q9Y2G4 727 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 ADGRG1Q9Y653 693 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 TMEM131Q92545 1883 aa17.95■□□□□ 0.46
PLOD3-209ENST00000460475 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.94■□□□□ 0.46
PLOD3-209ENST00000460475 UPK3BL1B0FP48 263 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 UPK3BL2E5RIL1 263 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 ARHGAP6O43182 974 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 MAP3K6O95382 1288 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 WNT1P04628 370 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 CTSKP43235 329 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 MARCKSL1P49006 195 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 BCL2L1Q07817 233 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 PPIDQ08752 370 aaKnown RBP17.94■□□□□ 0.46
PLOD3-209ENST00000460475 TFDP2Q14188 446 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 UGP2Q16851 508 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 KIF19Q2TAC6 998 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 SEL1L3Q68CR1 1132 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 SPOCD1Q6ZMY3 1216 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 MFSD2AQ8NA29 543 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 TMEM145Q8NBT3 493 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 KRT35Q92764 455 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 OLFM3Q96PB7 478 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 GTPBP2Q9BX10 602 aaKnown RBP17.94■□□□□ 0.46
PLOD3-209ENST00000460475 SLC17A9Q9BYT1 436 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 LRRK1Q38SD2 2015 aa17.94■□□□□ 0.46
PLOD3-209ENST00000460475 A0A0U1RQJ8 604 aa17.93■□□□□ 0.46
PLOD3-209ENST00000460475 GRID2IPA4D2P6 1211 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms