RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ETNPPLQ8TBG4 499 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 BICD2Q8TD16 824 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 TREX2Q9BQ50 279 aaPredicted RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 TRMOQ9BU70 441 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 PDCL3Q9H2J4 239 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 MUC13Q9H3R2 512 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 PLEKHA4Q9H4M7 779 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 MVB12BQ9H7P6 319 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 SCPEP1Q9HB40 452 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 TBC1D22BQ9NU19 505 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 ZBTB40Q9NUA8 1239 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 TRNAU1APQ9NX07 287 aaKnown RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 TUBA8Q9NY65 449 aaPredicted RBP3.58□□□□□ -1.84
RFC4-211ENST00000460408 ELOVL5Q9NYP7 299 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 A4GNTQ9UNA3 340 aa3.58□□□□□ -1.84
RFC4-211ENST00000460408 A0A096LPK6 155 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 LY6G6EA0A0G2JKS1 128 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 A0A1W2PQF6 199 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SLC25A17O43808 307 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 RNASEH2AO75792 299 aaKnown RBP3.57□□□□□ -1.84
RFC4-211ENST00000460408 SEC14L2O76054 403 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 MLYCDO95822 493 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SCGB1D1O95968 90 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 KLKB1P03952 638 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SLC2A4P14672 509 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SRD5A1P18405 259 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 POU1F1P28069 291 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 NR4A2P43354 598 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 POLGP54098 1239 aaPredicted RBP3.57□□□□□ -1.84
RFC4-211ENST00000460408 RPS3AP61247 264 aaKnown RBP3.57□□□□□ -1.84
RFC4-211ENST00000460408 NEXNQ0ZGT2 675 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ODF3L2Q3SX64 289 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SLC45A4Q5BKX6 768 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ATG9BQ674R7 924 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 CDC73Q6P1J9 531 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 C4orf50Q6ZRC1 276 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SLC46A3Q7Z3Q1 461 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 CPLX4Q7Z7G2 160 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 GPAT4Q86UL3 456 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ZDHHC17Q8IUH5 632 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 RBFAQ8N0V3 343 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ARFGAP1Q8N6T3 406 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ENGASEQ8NFI3 743 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 CADM4Q8NFZ8 388 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 INPP5DQ92835 1189 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SNAPC3Q92966 411 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 HMCESQ96FZ2 354 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ZNF333Q96JL9 665 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 TMEM79Q9BSE2 394 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 ITPAQ9BY32 194 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SPRTNQ9H040 489 aaPredicted RBP3.57□□□□□ -1.84
RFC4-211ENST00000460408 TASP1Q9H6P5 420 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 SPATS2LQ9NUQ6 558 aaKnown RBP3.57□□□□□ -1.84
RFC4-211ENST00000460408 INTS6Q9UL03 887 aaKnown RBP3.57□□□□□ -1.84
RFC4-211ENST00000460408 SCINQ9Y6U3 715 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 CAPN7Q9Y6W3 813 aa3.57□□□□□ -1.84
RFC4-211ENST00000460408 EIF4G1Q04637 1599 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 A0A0U1RQF3 1178 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 TMEM272A0A1B0GTI8 110 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 HSPB2A8KAH6 182 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 PRSS47A8MTI9 375 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 KLRF2D3W0D1 207 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 NPIPB11E5RHQ5 1161 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 STMND1H3BQB6 276 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 KLK8O60259 260 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 PAGE4O60829 102 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 PTP4A3O75365 173 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 SEC31AO94979 1220 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 NDUFB8O95169 186 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 MMP3P08254 477 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 HSPA1AP0DMV8 641 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 HSPA1BP0DMV9 641 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 SNHG28P0DPA3 235 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 ENO3P13929 434 aaPredicted RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 ZNF8P17098 575 aaPredicted RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 CHRNB2P17787 502 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 BDNFP23560 247 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 PPP3CCP48454 512 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 ALDH7A1P49419 539 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 CTCFP49711 727 aaPredicted RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 RASSF2P50749 326 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 HDAC4P56524 1084 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 TMPRSS3P57727 454 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 SETQ01105 290 aaPredicted RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 FAM27E3Q08E93 113 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 TMEM115Q12893 351 aaPredicted RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 GRIK3Q13003 919 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 EIF4A2Q14240 407 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 HSPB2Q16082 182 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 DUSP6Q16828 381 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 ALG11Q2TAA5 492 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 PLEKHO1Q53GL0 409 aaPredicted RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 Q5PR19 223 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 NUGGCQ68CJ6 796 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 NCAPH2Q6IBW4 605 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 TBC1D26Q86UD7 250 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 DHX40Q8IX18 779 aaKnown RBP3.56□□□□□ -1.84
RFC4-211ENST00000460408 KIAA2013Q8IYS2 634 aa3.56□□□□□ -1.84
RFC4-211ENST00000460408 MMP21Q8N119 569 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms