RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ZNF235Q14590 738 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 KIF19Q2TAC6 998 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 ANKRD20A8PQ5CZ79 823 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 LRRC38Q5VT99 294 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 KIAA1161Q6NSJ0 714 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 PARS2Q7L3T8 475 aaKnown RBP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 CHCHD4Q8N4Q1 142 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 PAF1Q8N7H5 531 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 NETO2Q8NC67 525 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 HCAR2Q8TDS4 363 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 EXOC2Q96KP1 924 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 CALR3Q96L12 384 aaKnown RBP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 ZNF641Q96N77 438 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 SLC6A18Q96N87 628 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 TUBGCP5Q96RT8 1024 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 ORAI3Q9BRQ5 295 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
ATG4B-213ENST00000460211 GAREM1Q9H706 876 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 ETNK2Q9NVF9 386 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 HAUS2Q9NVX0 235 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 DKK3Q9UBP4 350 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 LHX3Q9UBR4 397 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 FADS3Q9Y5Q0 445 aa15.13■□□□□ 0.01
ATG4B-213ENST00000460211 KNL1Q8NG31 2342 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 LRRD1A4D1F6 860 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 UPK3BL1B0FP48 263 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 C10orf142B7Z368 130 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 UPK3BL2E5RIL1 263 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 NDUFA10O95299 355 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 CD48P09326 243 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 MX2P20592 715 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 KDELR1P24390 212 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 SERPINA4P29622 427 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 AKT2P31751 481 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 SUOXP51687 545 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 HADHBP55084 474 aaKnown RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 OVGP1Q12889 678 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 SGCGQ13326 291 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 LBRQ14739 615 aaKnown RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 SUZ12Q15022 739 aaKnown RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 HLA-BQ31612 363 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 ARHGAP36Q6ZRI8 547 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 SRLQ86TD4 932 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 CPNE8Q86YQ8 564 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 RHOT1Q8IXI2 618 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 TXLNBQ8N3L3 684 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 MFSD2AQ8NA29 543 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 TSEN2Q8NCE0 465 aaKnown RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 ZNF830Q96NB3 372 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 PSKH2Q96QS6 385 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 BAG1Q99933 345 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 SUV39H2Q9H5I1 410 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 ATP13A3Q9H7F0 1226 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 EBF2Q9HAK2 575 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 KLHL11Q9NVR0 708 aa15.12■□□□□ 0.01
ATG4B-213ENST00000460211 DDX56Q9NY93 547 aaKnown RBP15.12■□□□□ 0.01
ATG4B-213ENST00000460211 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-213ENST00000460211 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 RNF103O00237 685 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 SLC31A1O15431 190 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 INSIG1O15503 277 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 MAFKO60675 156 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 ZNF883P0CG24 379 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 HNRNPA2B1P22626 353 aaKnown RBP15.11■□□□□ 0.01
ATG4B-213ENST00000460211 FECHP22830 423 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 PAFAH1B3Q15102 231 aaKnown RBP15.11■□□□□ 0.01
ATG4B-213ENST00000460211 MARC1Q5VT66 337 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 TIGD7Q6NT04 549 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-213ENST00000460211 IQCHQ86VS3 1027 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 VSIG1Q86XK7 387 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 TP53INP2Q8IXH6 220 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 PCDH19Q8TAB3 1148 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 RAPGEF5Q92565 580 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 FAF2Q96CS3 445 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 GDF3Q9NR23 364 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 SNX11Q9Y5W9 270 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 SLCO1B1Q9Y6L6 691 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 PCDH15Q96QU1 1955 aa15.11■□□□□ 0.01
ATG4B-213ENST00000460211 ITPR1Q14643 2758 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-213ENST00000460211 ZNF487B1APH4 448 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 TLR4O00206 839 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 TAF4O00268 1085 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 NEBLO76041 1014 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 TNNT1P13805 278 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 ZFXP17010 805 aaPredicted RBP15.1■□□□□ 0.01
ATG4B-213ENST00000460211 COMTP21964 271 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 CTSKP43235 329 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 SCNN1BP51168 640 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 NAP1L1P55209 391 aaKnown RBP15.1■□□□□ 0.01
ATG4B-213ENST00000460211 AP1S1P61966 158 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 POLR2LP62875 67 aaKnown RBP15.1■□□□□ 0.01
ATG4B-213ENST00000460211 BCL2L1Q07817 233 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 SLC10A7Q0GE19 358 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 ELP6Q0PNE2 266 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 HNRNPDQ14103 355 aaKnown RBP15.1■□□□□ 0.01
ATG4B-213ENST00000460211 ZNF284Q2VY69 593 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 NCBP2-AS2Q69YL0 99 aa15.1■□□□□ 0.01
ATG4B-213ENST00000460211 ERAP2Q6P179 960 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms