RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PDK2Q15119 407 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 CYTH1Q15438 398 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 ASTE1Q2TB18 679 aaPredicted RBP17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 TMEM259Q4ZIN3 620 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 ZFYVE27Q5T4F4 411 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 RAB44Q7Z6P3 723 aaPredicted RBP17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 LRRC49Q8IUZ0 686 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 RHOT2Q8IXI1 618 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 TMEM145Q8NBT3 493 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 KCTD6Q8NC69 237 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 ADAMTS14Q8WXS8 1223 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 GATA6Q92908 595 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 BTBD6Q96KE9 485 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 ATP13A3Q9H7F0 1226 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 PCDH18Q9HCL0 1135 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 HAUS2Q9NVX0 235 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 LHX3Q9UBR4 397 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 SEPT3Q9UH03 358 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 KLK13Q9UKR3 277 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 ZMIZ1Q9ULJ6 1067 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 HS3ST3A1Q9Y663 406 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 TRPM6Q9BX84 2022 aa17.74■□□□□ 0.43
SCARNA2-201ENST00000458748 COL5A1P20908 1838 aaPredicted RBP17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 FAM221BA6H8Z2 402 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 A6NNZ2 444 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 RNF103O00237 685 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 PRLRP16471 622 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 MAN1A1P33908 653 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 ARHGAP25P42331 645 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 SEL1L3Q68CR1 1132 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 ERAP2Q6P179 960 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 BRAT1Q6PJG6 821 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 ARHGAP12Q8IWW6 846 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 ATPAF2Q8N5M1 289 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 NPWQ8N729 165 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 CXorf40AQ8TE69 158 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 ASB12Q8WXK4 309 aa17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 LUC7LQ9NQ29 371 aaKnown RBP17.73■□□□□ 0.43
SCARNA2-201ENST00000458748 FPGTO14772 594 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 TNFSF14O43557 240 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 THEGLP0DJG4 465 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 AMPD1P23109 780 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 NFKBIAP25963 317 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 POLR2LP62875 67 aaKnown RBP17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 ZNF235Q14590 738 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 LBRQ14739 615 aaKnown RBP17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 SRLQ86TD4 932 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 CHCHD4Q8N4Q1 142 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 KDF1Q8NAX2 398 aaPredicted RBP17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 DENND6BQ8NEG7 585 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 KLK6Q92876 244 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 EXOC2Q96KP1 924 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 LENG8Q96PV6 779 aaPredicted RBP17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 CALN1Q9BXU9 219 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 SUV39H2Q9H5I1 410 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 INTUQ9ULD6 942 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 ZFR2Q9UPR6 939 aaKnown RBP17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 BTBD3Q9Y2F9 522 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 MSRB2Q9Y3D2 182 aa17.72■□□□□ 0.43
SCARNA2-201ENST00000458748 A0A1W2PQ67 120 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 DKK1O94907 266 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 PAK4O96013 591 aaPredicted RBP17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 TCF4P15884 667 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 GJC1P36383 396 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 AP1S1P61966 158 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 BCL2L1Q07817 233 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 TBX2Q13207 712 aaPredicted RBP17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 SHBQ15464 509 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 HS1BP3Q53T59 392 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 ODF2Q5BJF6 829 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 SPATS2Q86XZ4 545 aaKnown RBP17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 SLC35G2Q8TBE7 412 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 FAM71BQ8TC56 605 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 SAP25Q8TEE9 199 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 PSKH2Q96QS6 385 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 CHP1Q99653 195 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 MYOCQ99972 504 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 ZNF670Q9BS34 389 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 C1QTNF2Q9BXJ5 285 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 PACSIN1Q9BY11 444 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 FTSJ1Q9UET6 329 aa17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 RALYQ9UKM9 306 aaKnown RBP17.71■□□□□ 0.43
SCARNA2-201ENST00000458748 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 TMEM8BA6NDV4 472 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 IGLON5A6NGN9 336 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 AREL1O15033 823 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 TM7SF2O76062 418 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 EPHA8P29322 1005 aaPredicted RBP17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 ABL2P42684 1182 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 RABIFP47224 123 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 IL9RQ01113 521 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 RALGPS1Q5JS13 557 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 PRAMEF14Q5SWL7 426 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 TXNRD3NBQ6F5E7 133 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 KYAT3Q6YP21 454 aaKnown RBP17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 ABI3BPQ7Z7G0 1075 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 SLCO6A1Q86UG4 719 aa17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 TSEN2Q8NCE0 465 aaKnown RBP17.7■□□□□ 0.42
SCARNA2-201ENST00000458748 TSC1Q92574 1164 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms