RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ADCY6O43306 1168 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 FADS2O95864 444 aaKnown RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 IL1BP01584 269 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 SNRPB2P08579 225 aaKnown RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 MYBL2P10244 700 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 INO80DQ53TQ3 878 aaPredicted RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 RPTNQ6XPR3 784 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ANKS1BQ7Z6G8 1248 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 NELL1Q92832 810 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 ZCCHC2Q9C0B9 1178 aaKnown RBP19.8■□□□□ 0.76
SNX27-204ENST00000458013 LRCH1Q9Y2L9 728 aa19.8■□□□□ 0.76
SNX27-204ENST00000458013 TRBV23OR9-2A0A075B6M9 112 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 CCDC182A6NF36 153 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 WARSP23381 471 aaKnown RBP19.79■□□□□ 0.76
SNX27-204ENST00000458013 RPL22P35268 128 aaKnown RBP19.79■□□□□ 0.76
SNX27-204ENST00000458013 PMF1Q6P1K2 205 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 ZNF549Q6P9A3 640 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 GK5Q6ZS86 529 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 KATNAL2Q8IYT4 538 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 OR10H3O60404 316 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 NRP2O60462 931 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 AQP1P29972 269 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 COPZ1P61923 177 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 SQLEQ14534 574 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 B3GNT6Q6ZMB0 384 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
SNX27-204ENST00000458013 ITSN1Q15811 1721 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 CYP1A1P04798 512 aaPredicted RBP19.79■□□□□ 0.76
SNX27-204ENST00000458013 PTPRAP18433 802 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 RABGGTBP53611 331 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 CDC42P60953 191 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 PEX6Q13608 980 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 LPCAT4Q643R3 524 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 OLFML2AQ68BL7 652 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 CXCL17Q6UXB2 119 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 ALLCQ8N6M5 410 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 TSPAN14Q8NG11 270 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 SNX6Q9UNH7 406 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 ARIH1Q9Y4X5 557 aaPredicted RBP19.79■□□□□ 0.76
SNX27-204ENST00000458013 TRIM17Q9Y577 477 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 MED22Q15528 200 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 KLHL5Q96PQ7 755 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 B4GALT5O43286 388 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 LEMD2Q8NC56 503 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 FAM98AQ8NCA5 519 aaKnown RBP19.79■□□□□ 0.76
SNX27-204ENST00000458013 OR7A2PQ8NGA2 310 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 KCNK4Q9NYG8 393 aa19.79■□□□□ 0.76
SNX27-204ENST00000458013 ANXA5P08758 320 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 CERS2Q96G23 380 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 MRPL45Q9BRJ2 306 aaKnown RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 BRD9Q9H8M2 597 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 MTF2Q9Y483 593 aaPredicted RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 CD3EAPO15446 510 aaKnown RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 THOP1P52888 689 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 PSME3P61289 254 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 EVX2Q03828 476 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 IL17AQ16552 155 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 VPS51Q9UID3 782 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 ACKR2O00590 384 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 SLC28A2O43868 658 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 OR5F1O95221 314 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 RPN2P04844 631 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 CCNYL3P0C7X3 344 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 FOSL2P15408 326 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 GNA13Q14344 377 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 MZT2AQ6P582 158 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 KYAT3Q6YP21 454 aaKnown RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 FBXW8Q8N3Y1 598 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 BHLHE41Q9C0J9 482 aaPredicted RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 C12orf65Q9H3J6 166 aaKnown RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 RBMX2Q9Y388 322 aaKnown RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 FRMPD4Q14CM0 1322 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 HGFP14210 728 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 CPSF6Q16630 551 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNX27-204ENST00000458013 ZFP1Q6P2D0 407 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 DGKBQ9Y6T7 804 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 AHCYL1O43865 530 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 SMIM10L2AP0DMW4 78 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 SMIM10L2BP0DMW5 78 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 ITGB3BPQ13352 177 aaPredicted RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 LDLRAP1Q5SW96 308 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 RBM43Q6ZSC3 357 aaKnown RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 NET1Q7Z628 596 aaPredicted RBP19.78■□□□□ 0.76
SNX27-204ENST00000458013 KLHL23Q8NBE8 558 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 EEF1AKMT1Q8WVE0 214 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 MCRS1Q96EZ8 462 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 LINGO1Q96FE5 620 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 CD84Q9UIB8 345 aa19.78■□□□□ 0.76
SNX27-204ENST00000458013 RASAL3Q86YV0 1011 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 VPS4AQ9UN37 437 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 ZC3H13Q5T200 1668 aaKnown RBP19.77■□□□□ 0.76
SNX27-204ENST00000458013 REREQ9P2R6 1566 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 IQCF5A8MTL0 148 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 ATP5C1P36542 298 aaKnown RBP19.77■□□□□ 0.76
SNX27-204ENST00000458013 SPIRE1Q08AE8 756 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 PAGE2BQ5JRK9 111 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 ZNF697Q5TEC3 545 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 APLFQ8IW19 511 aaPredicted RBP19.77■□□□□ 0.76
SNX27-204ENST00000458013 ATP6V1C2Q8NEY4 427 aa19.77■□□□□ 0.76
SNX27-204ENST00000458013 ATG10Q9H0Y0 220 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms