RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 BMP7P18075 431 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 S100A2P29034 98 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 UGT2B15P54855 530 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 IL2P60568 153 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SEC23AQ15436 765 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZNHIT3Q15649 155 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ATP13A4Q4VNC1 1196 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SPATA19Q7Z5L4 167 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 NXF3Q9H4D5 531 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ATP13A1Q9HD20 1204 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 HSPE1-MOB4S4R3N1 261 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 DDX60Q8IY21 1712 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 H7C2Y5 167 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PITPNM1O00562 1244 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 E2F3O00716 465 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 NUAK1O60285 661 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CYP2A6P11509 494 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 KLHL35Q6PF15 583 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PQLC1Q8N2U9 271 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GMCL1P1Q8NEA9 526 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TCEAL3Q969E4 200 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZKSCAN4Q969J2 545 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PRICKLE1Q96MT3 831 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PAIP1Q9H074 479 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CHRNGP07510 517 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PTGR1Q14914 329 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RALGPS1Q5JS13 557 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 HACD4Q5VWC8 232 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 DRICH1Q6PGQ1 229 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TSHZ1Q6ZSZ6 1077 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ASB18Q6ZVZ8 466 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 EPHX4Q8IUS5 362 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SPATA2LQ8IUW3 424 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 FBXO39Q8N4B4 442 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZC3H10Q96K80 434 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF341Q9BYN7 854 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 POLR3FQ9H1D9 316 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TBX20Q9UMR3 447 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 H7C1W4 665 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 KLF11O14901 512 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PRLP01236 227 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 HADHBP55084 474 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SULT2A1Q06520 285 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CYP2A13Q16696 494 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ADGRG6Q86SQ4 1221 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF671Q8TAW3 534 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 IRGQQ8WZA9 623 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PSKH2Q96QS6 385 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GPR63Q9BZJ6 419 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 DNAJC16Q9Y2G8 782 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PPEF1O14829 653 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PMM2O15305 246 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 FADS2O95864 444 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 FGF1P05230 155 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CLK3P49761 638 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TAS2R43P59537 309 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 DGKDQ16760 1214 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ARMC6Q6NXE6 501 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CHMP1BQ7LBR1 199 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MCFD2Q8NI22 146 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MCEEQ96PE7 176 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MRPL9Q9BYD2 267 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SLC22A4Q9H015 551 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TRIT1Q9H3H1 467 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CD93Q9NPY3 652 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SEMA3GQ9NS98 782 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CNOT11Q9UKZ1 510 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GNG14A0A1W2PPG7 69 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CENPBD1B2RD01 187 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CST8O60676 142 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PGK1P00558 417 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 KITP10721 976 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 NRIP1P48552 1158 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 VWA5B1Q5TIE3 1220 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 C7orf31Q8N865 590 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RNF217Q8TC41 542 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 MTFR1LQ9H019 292 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 C3orf14Q9HBI5 128 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 UBOX5O94941 541 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PEX3P56589 373 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TSTA3Q13630 321 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF829Q3KNS6 432 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 C12orf50Q8NA57 414 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TTLQ8NG68 377 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 ADGRE2Q9UHX3 823 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 TRIM38O00635 465 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PVALBP20472 110 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SREBF1P36956 1147 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 GRIA2P42262 883 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PDK3Q15120 406 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 FSCN1Q16658 493 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 EIPR1Q53HC9 387 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PLEKHG4Q58EX7 1191 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 PET117Q6UWS5 81 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 CLYBLQ8N0X4 340 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 RASGEF1AQ8N9B8 481 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 SMYD1Q8NB12 490 aa5.25□□□□□ -1.57
CSMD3-204ENST00000455883 EPS8L3Q8TE67 593 aaKnown RBP5.25□□□□□ -1.57
CSMD3-204ENST00000455883 BBS4Q96RK4 519 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms