RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TOP6BLQ8N6T0 577 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 DBF4BQ8NFT6 615 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
DDR1-239ENST00000452441 EGFL8Q99944 293 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 C1orf50Q9BV19 199 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 FRMD8Q9BZ67 464 aaPredicted RBP11.28□□□□□ -0.6
DDR1-239ENST00000452441 CCDC90BQ9GZT6 254 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 BRD8Q9H0E9 1235 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 WDR41Q9HAD4 459 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
DDR1-239ENST00000452441 CDH9Q9ULB4 789 aa11.28□□□□□ -0.6
DDR1-239ENST00000452441 PHIPQ8WWQ0 1821 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 ZNF839A8K0R7 811 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 GMNNO75496 209 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 DAB1O75553 588 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 SIX3O95343 332 aaPredicted RBP11.27□□□□□ -0.6
DDR1-239ENST00000452441 GSTT1P30711 240 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 FMO4P31512 558 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 DSC2Q02487 901 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 DLG1Q12959 904 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 RBM20Q5T481 1227 aaKnown RBP11.27□□□□□ -0.6
DDR1-239ENST00000452441 GPR158Q5T848 1215 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 MARC1Q5VT66 337 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 PAOXQ6QHF9 649 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 TPGS1Q6ZTW0 290 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 RAB44Q7Z6P3 723 aaPredicted RBP11.27□□□□□ -0.6
DDR1-239ENST00000452441 PIM3Q86V86 326 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 IFNL1Q8IU54 200 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 NAT16Q8N8M0 369 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 PCSK9Q8NBP7 692 aaKnown RBP11.27□□□□□ -0.6
DDR1-239ENST00000452441 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 TBL1YQ9BQ87 522 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 CCDC106Q9BWC9 280 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 Q9H521 79 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 RHBDL2Q9NX52 303 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 ZDHHC2Q9UIJ5 367 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 POMPQ9Y244 141 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 SSC5DA1L4H1 1573 aa11.27□□□□□ -0.6
DDR1-239ENST00000452441 PTGESO14684 152 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 AXIN1O15169 862 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 GCATO75600 419 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 RHOBTB1O94844 696 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 ITGB1P05556 798 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 THRAP10827 490 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 PCNAP12004 261 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 PPP1R8Q12972 351 aaKnown RBP11.27□□□□□ -0.61
DDR1-239ENST00000452441 PCLAFQ15004 111 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 TCEA2Q15560 299 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 TRPC4APQ8TEL6 797 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 EFCAB1Q9HAE3 211 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 MID1IP1Q9NPA3 183 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 ZNF180Q9UJW8 692 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 FBXO5Q9UKT4 447 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 PTGDR2Q9Y5Y4 395 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.27□□□□□ -0.61
DDR1-239ENST00000452441 AHSGP02765 367 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 PRKCHP24723 683 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 PTPN9P43378 593 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 CD151P48509 253 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 WASHC5Q12768 1159 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 MAP7Q14244 749 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 MYO1HQ8N1T3 1032 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 LRRC39Q96DD0 335 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 TMEM169Q96HH4 297 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 CNGB3Q9NQW8 809 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 FAF1Q9UNN5 650 aaPredicted RBP11.27□□□□□ -0.61
DDR1-239ENST00000452441 ACTL7AQ9Y615 435 aa11.27□□□□□ -0.61
DDR1-239ENST00000452441 HMX2A2RU54 273 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 ANGPT2O15123 496 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 UBDO15205 165 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 SNX2O60749 519 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 RNASEH1O60930 286 aaKnown RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 OR6B1O95007 311 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 XRCC1P18887 633 aaPredicted RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 RAB27AP51159 221 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 WNT3AP56704 352 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 MAPRE1Q15691 268 aaKnown RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 SLC9A4Q6AI14 798 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 PRSS55Q6UWB4 352 aaPredicted RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 DHDDSQ86SQ9 333 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 APLFQ8IW19 511 aaPredicted RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 ZNF786Q8N393 782 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 CNDP1Q96KN2 507 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 CIB1Q99828 191 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 PLAC1Q9HBJ0 212 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 MARCH2Q9P0N8 246 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 UXTQ9UBK9 157 aaPredicted RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 MGAMO43451 1857 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 TYW5A2RUC4 315 aaKnown RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 JUNP05412 331 aaKnown RBP11.26□□□□□ -0.61
DDR1-239ENST00000452441 LINC00032P0C843 101 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 YWHAQP27348 245 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 GRIA3P42263 894 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 ALDH1A3P47895 512 aa11.26□□□□□ -0.61
DDR1-239ENST00000452441 TUSC3Q13454 348 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms