RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 MFHAS1Q9Y4C4 1052 aa13.47□□□□□ -0.25
HMGB3-204ENST00000448905 DOCK9Q9BZ29 2069 aa13.47□□□□□ -0.25
HMGB3-204ENST00000448905 FAM170AA1A519 330 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 AREL1O15033 823 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 SPINT1O43278 529 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 GFPT2O94808 682 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 LRIG2O94898 1065 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 TNFSF15O95150 251 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 EPHB2P29323 1055 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 ABL2P42684 1182 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 PTPN9P43378 593 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.25
HMGB3-204ENST00000448905 YBEYP58557 167 aaPredicted RBP13.46□□□□□ -0.25
HMGB3-204ENST00000448905 RHOAP61586 193 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 SPIDRQ14159 915 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 LRRC14Q15048 493 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 C15orf59Q2T9L4 293 aaPredicted RBP13.46□□□□□ -0.25
HMGB3-204ENST00000448905 TCP11X2Q5H9J9 407 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 FKBP15Q5T1M5 1219 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 CFAP58Q5T655 872 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 TRNP1Q6NT89 227 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 DPY19L2P1Q6NXN4 242 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 LEKR1Q6ZMV7 388 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 NLRP14Q86W24 1093 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 STRADBQ9C0K7 418 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 NDFIP2Q9NV92 336 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 ENTPD2Q9Y5L3 495 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
HMGB3-204ENST00000448905 CCDC187A0A096LP49 1063 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 FAM72CH0Y354 149 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 J3QKU1 62 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 GCATO75600 419 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
HMGB3-204ENST00000448905 TIMP2P16035 220 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 TSHRP16473 764 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 STAT1P42224 750 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 EFHC2Q5JST6 749 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 ARTNQ5T4W7 220 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 ATXN7L2Q5T6C5 722 aaPredicted RBP13.45□□□□□ -0.26
HMGB3-204ENST00000448905 FAM72AQ5TYM5 149 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 MANEALQ5VSG8 457 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 FAM72DQ6L9T8 149 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 ERAP2Q6P179 960 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 CRTC1Q6UUV9 634 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 MACC1Q6ZN28 852 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 FAM72BQ86X60 149 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 GKN2Q86XP6 184 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 SLC30A5Q8TAD4 765 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 GPT2Q8TD30 523 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 FAM172AQ8WUF8 416 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
HMGB3-204ENST00000448905 CENPIQ92674 756 aaPredicted RBP13.45□□□□□ -0.26
HMGB3-204ENST00000448905 NTAN1Q96AB6 310 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 EPAS1Q99814 870 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 CCDC3Q9BQI4 270 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 CPEB1Q9BZB8 566 aaKnown RBP13.45□□□□□ -0.26
HMGB3-204ENST00000448905 CATSPERBQ9H7T0 1116 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 SYNDIG1Q9H7V2 258 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 ITM2BQ9Y287 266 aa13.45□□□□□ -0.26
HMGB3-204ENST00000448905 K7ENP7 123 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 TMCC1O94876 653 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 RASGRP1O95267 797 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 CALB1P05937 261 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 RFC1P35251 1148 aaPredicted RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 SOX5P35711 763 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 HK3P52790 923 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 AIF1P55008 147 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 POLR2FP61218 127 aaKnown RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 EIF3IQ13347 325 aaKnown RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 PARP15Q460N3 678 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 TMEM52BQ4KMG9 183 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 INO80CQ6PI98 192 aaPredicted RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 RD3Q7Z3Z2 195 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 HID1Q8IV36 788 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 SLC35F3Q8IY50 421 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 RBFAQ8N0V3 343 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 ARL10Q8N8L6 244 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 ZNF641Q96N77 438 aaPredicted RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 GFM1Q96RP9 751 aaKnown RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 C11orf70Q9BRQ4 267 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 WRAP53Q9BUR4 548 aaKnown RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 LRRC61Q9BV99 259 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 CLSTN2Q9H4D0 955 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 MBNL1Q9NR56 388 aaKnown RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 SAMSN1Q9NSI8 373 aaKnown RBP13.44□□□□□ -0.26
HMGB3-204ENST00000448905 GGT7Q9UJ14 662 aa13.44□□□□□ -0.26
HMGB3-204ENST00000448905 KNTC1P50748 2209 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms