RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 DUOXA1Q1HG43 343 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 RALGPS1Q5JS13 557 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 BBS12Q6ZW61 710 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 PARS2Q7L3T8 475 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 TTC7BQ86TV6 843 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 PRPF39Q86UA1 669 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 TEX26Q8N6G2 289 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 TRIM58Q8NG06 486 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 HCAR2Q8TDS4 363 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 LRRN4Q8WUT4 740 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 TFB1MQ8WVM0 346 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 DNASE2BQ8WZ79 361 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 ALG3Q92685 438 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 FAM131CQ96AQ9 280 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 BIRC7Q96CA5 298 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 HAUS1Q96CS2 278 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 RMDN1Q96DB5 314 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 HES6Q96HZ4 224 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 NUDCD1Q96RS6 583 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 FERMT1Q9BQL6 677 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 MGME1Q9BQP7 344 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 POLR1EQ9GZS1 481 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 SUV39H2Q9H5I1 410 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 SEPT10Q9P0V9 454 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 DKK3Q9UBP4 350 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 AMACRQ9UHK6 382 aa14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 EIF2B4Q9UI10 523 aaKnown RBP14.18□□□□□ -0.14
GTF3C3-206ENST00000448539 SPAG17Q6Q759 2223 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 PRR5-ARHGAP8B1AHC4 643 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 MUSKO15146 869 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 DDX3YO15523 660 aaKnown RBP14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 CFIP05156 583 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 ZNF806P0C7X5 589 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 PYGMP11217 842 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 CES1P23141 567 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 CD27P26842 260 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 ZNF211Q13398 564 aaPredicted RBP14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 RPS6KA1Q15418 735 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 TRIM61Q5EBN2 209 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 PLA2G2CQ5R387 149 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 SEL1L2Q5TEA6 688 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 NEK5Q6P3R8 708 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 BRAT1Q6PJG6 821 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 CAMK1DQ8IU85 385 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 FEM1CQ96JP0 617 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 OLFM3Q96PB7 478 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 NUSAP1Q9BXS6 441 aaKnown RBP14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 SMOC1Q9H4F8 434 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 TMEM74BQ9NUR3 256 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 SAE1Q9UBE0 346 aaPredicted RBP14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 SDK1Q7Z5N4 2213 aa14.17□□□□□ -0.14
GTF3C3-206ENST00000448539 A0A1B0GTW7 788 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 A0A1W2PPC4 97 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 A0A1W2PQ67 120 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 TTC24A2A3L6 582 aaPredicted RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 HACD1B0YJ81 288 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 H7C0C1 242 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 APOC4-APOC2K7ER74 178 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 KCNK1O00180 336 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 BCAT2O15382 392 aaPredicted RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 MTSS1O43312 755 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 TSPAN6O43657 245 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 AP1G1O43747 822 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 RNGTTO60942 597 aaKnown RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 JCHAINP01591 159 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 APOC2P02655 101 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 IGHV4-34P06331 123 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PECAM1P16284 738 aaPredicted RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 NUDT1P36639 197 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 ATP5OP48047 213 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 SUOXP51687 545 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 TAS2R38P59533 333 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PPP2CBP62714 309 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 POLR2LP62875 67 aaKnown RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PPP2CAP67775 309 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 FOXK2Q01167 660 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 ADCY2Q08462 1091 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 AASDHQ4L235 1098 aaPredicted RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PEAR1Q5VY43 1037 aaPredicted RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 ERAP2Q6P179 960 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PRR23CQ6ZRP0 262 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 ERMP1Q7Z2K6 904 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 ZC3H18Q86VM9 953 aaKnown RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 TRIM69Q86WT6 500 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PDCD6IPQ8WUM4 868 aaKnown RBP14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 SEMA3CQ99985 751 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 KCNF1Q9H3M0 494 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 NOD2Q9HC29 1040 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 PARD6AQ9NPB6 346 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 SLC6A14Q9UN76 642 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 FADS3Q9Y5Q0 445 aa14.16□□□□□ -0.14
GTF3C3-206ENST00000448539 OTOGLQ3ZCN5 2332 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 EP300Q09472 2414 aaPredicted RBP14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 A0A1W2PQU0 124 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 GJB3O75712 270 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 SERPINF2P08697 491 aa14.15□□□□□ -0.14
GTF3C3-206ENST00000448539 TIMP2P16035 220 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms