RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RGRP47804 291 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 ARMC3Q5W041 872 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 OR6Y1Q8NGX8 325 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 MGME1Q9BQP7 344 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 NMRAL1Q9HBL8 299 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 KLC4Q9NSK0 619 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 KCTD3Q9Y597 815 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 A0A1B0GVM2 712 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 TCAF2A6NFQ2 919 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 LDB2O43679 373 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 KDELR3O43731 214 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 DNAJC6O75061 913 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 PAPSS2O95340 614 aaPredicted RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 RHOCP08134 193 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 RALBP11234 206 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ARSDP51689 593 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 AQP5P55064 265 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 CDK18Q07002 472 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ITGA9Q13797 1035 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ZNF789Q5FWF6 425 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 C16orf59Q7L2K0 433 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 TTC7BQ86TV6 843 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 CENPLQ8N0S6 344 aaPredicted RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 FEM1CQ96JP0 617 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 YME1L1Q96TA2 773 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 SORT1Q99523 831 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 MRPL17Q9NRX2 175 aaKnown RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 ILVBLA1L0T0 632 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 F11P03951 625 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 KRT16P08779 473 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 HNRNPH1P31943 449 aaKnown RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 CD151P48509 253 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 OXCT1P55809 520 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ZXDBP98169 803 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 GALNT3Q14435 633 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 CXorf57Q6NSI4 855 aaKnown RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 CNSTQ6PJW8 725 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 CHST9Q7L1S5 443 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 OTOP2Q7RTS6 562 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 CCDC91Q7Z6B0 441 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 TMEM151AQ8N4L1 468 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 IFT43Q96FT9 208 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 PSKH2Q96QS6 385 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 IL21Q9HBE4 155 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 TRPC7Q9HCX4 862 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 CPSF2Q9P2I0 782 aaKnown RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 UBA2Q9UBT2 640 aaPredicted RBP17.6■□□□□ 0.41
SMC6-206ENST00000446852 TLK1Q9UKI8 766 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ANKRD6Q9Y2G4 727 aa17.6■□□□□ 0.41
SMC6-206ENST00000446852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 TK2O00142 265 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 LILRB3O75022 631 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 SBK3P0C264 359 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 MBL2P11226 248 aaPredicted RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 RAG1P15918 1043 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 PPP3CCP48454 512 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 EPHB3P54753 998 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 ZNF177Q13360 481 aaPredicted RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 ADAMTS19Q8TE59 1207 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 KCTD4Q8WVF5 259 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 SLC7A6OSQ96CW6 309 aaPredicted RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 EXOC2Q96KP1 924 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 TASP1Q9H6P5 420 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 SEPT3Q9UH03 358 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 DNAJC16Q9Y2G8 782 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 TBC1D30Q9Y2I9 924 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 KIAA0355O15063 1070 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 SERPINF2P08697 491 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 GRK2P25098 689 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 RAB10P61026 200 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 SMAD3P84022 425 aaKnown RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 ZBTB16Q05516 673 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 NAPRTQ6XQN6 538 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 KIAA0408Q6ZU52 694 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 TRIB3Q96RU7 358 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 ACE2Q9BYF1 805 aaPredicted RBP17.59■□□□□ 0.41
SMC6-206ENST00000446852 LRMDAQ9H2I8 198 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 NOD2Q9HC29 1040 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 STOML2Q9UJZ1 356 aa17.59■□□□□ 0.41
SMC6-206ENST00000446852 DOCK6Q96HP0 2047 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 ATP5HO75947 161 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 FGF1P05230 155 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 HLA-DPA1P20036 260 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 GLRBP48167 497 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 TAS2R39P59534 338 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 SLC12A1Q13621 1099 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 RBM20Q5T481 1227 aaKnown RBP17.58■□□□□ 0.41
SMC6-206ENST00000446852 TXNDC8Q6A555 127 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 SETD3Q86TU7 594 aaPredicted RBP17.58■□□□□ 0.41
SMC6-206ENST00000446852 SPNS2Q8IVW8 549 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 GPATCH11Q8N954 259 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 PIWIL2Q8TC59 973 aaKnown RBP17.58■□□□□ 0.41
SMC6-206ENST00000446852 HDAC10Q969S8 669 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 ELMO2Q96JJ3 720 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 CINPQ9BW66 212 aaPredicted RBP17.58■□□□□ 0.41
SMC6-206ENST00000446852 NMUR2Q9GZQ4 415 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 SAR1AQ9NR31 198 aa17.58■□□□□ 0.41
SMC6-206ENST00000446852 OR51F1A6NGY5 319 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms