RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 TRMT10CQ7L0Y3 403 aaKnown RBP9.62□□□□□ -0.87
NPHP1-207ENST00000445609 MREGQ8N565 214 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 MSANTD3Q96H12 275 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 TUBGCP5Q96RT8 1024 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 TDRD1Q9BXT4 1180 aaKnown RBP9.62□□□□□ -0.87
NPHP1-207ENST00000445609 CPEB1Q9BZB8 566 aaKnown RBP9.62□□□□□ -0.87
NPHP1-207ENST00000445609 TMEM245Q9H330 911 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 SEMA4AQ9H3S1 761 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 ATP13A3Q9H7F0 1226 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 CHKBQ9Y259 395 aa9.62□□□□□ -0.87
NPHP1-207ENST00000445609 WASH3PC4AMC7 463 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 K7EQS6 105 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 NPC1O15118 1278 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 BANF1O75531 89 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 NDST3O95803 873 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 HNRNPLP14866 589 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 HLA-DPA1P20036 260 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 ELK3P41970 407 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 CHRNA4P43681 627 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 GRM3Q14832 879 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 FASTKD3Q14CZ7 662 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PON2Q15165 354 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 HNRNPA1L2Q32P51 320 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 CCDC38Q502W7 563 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 TMEM196Q5HYL7 178 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 EGFLAMQ63HQ2 1017 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 CAMK1DQ8IU85 385 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SLC25A41Q8N5S1 370 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PYROXD1Q8WU10 500 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PRUNE2Q8WUY3 3088 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PTPRN2Q92932 1015 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SIGLEC10Q96LC7 697 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 C9orf72Q96LT7 481 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 TRIB3Q96RU7 358 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 ADGRE3Q9BY15 652 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 DUSP12Q9UNI6 340 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 TEX264Q9Y6I9 313 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 COL4A3Q01955 1670 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SPTBN5Q9NRC6 3674 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 UNC80Q8N2C7 3258 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 EDDM13A0A1B0GTR0 161 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SOCS5O75159 536 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PRLP01236 227 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 ATXN1LP0C7T5 689 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 TPH1P17752 444 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 DRD1P21728 446 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 MGAT1P26572 445 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SERPINA4P29622 427 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 GKP32189 559 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 TRAF2Q12933 501 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 KYNUQ16719 465 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SIRPB2Q5JXA9 342 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 IER5LQ5T953 404 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 EMC10Q5UCC4 262 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 AGGF1Q8N302 714 aaeCLIP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 MPP5Q8N3R9 675 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 ZNF366Q8N895 744 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 ZNF513Q8N8E2 541 aaPredicted RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 CHST14Q8NCH0 376 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 FBXO36Q8NEA4 188 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PDCD6IPQ8WUM4 868 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 UBLCP1Q8WVY7 318 aaPredicted RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 TTC25Q96NG3 672 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 HEPHQ9BQS7 1158 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 IL22Q9GZX6 179 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 PABPC3Q9H361 631 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 CDC42EP4Q9H3Q1 356 aaKnown RBP9.61□□□□□ -0.87
NPHP1-207ENST00000445609 MTG2Q9H4K7 406 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 MAD1L1Q9Y6D9 718 aa9.61□□□□□ -0.87
NPHP1-207ENST00000445609 MAGEB16A2A368 324 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 TRAFD1O14545 582 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-207ENST00000445609 HTRA2O43464 458 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-207ENST00000445609 PIGNO95427 931 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 TTC4O95801 387 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 CPP00450 1065 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 FGF1P05230 155 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 PDHA1P08559 390 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 HSD17B3P37058 310 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 IL12RB1P42701 662 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 KIR2DL1P43626 348 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-207ENST00000445609 SPDYCQ5MJ68 293 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 CERCAMQ5T4B2 595 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 ARMC12Q5T9G4 340 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 FSTL4Q6MZW2 842 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 HDXQ7Z353 690 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 IGDCC3Q8IVU1 814 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 PALM2Q8IXS6 379 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 EZH1Q92800 747 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-207ENST00000445609 RMDN1Q96DB5 314 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 STAMBPL1Q96FJ0 436 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 ZNF641Q96N77 438 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-207ENST00000445609 ACOX2Q99424 681 aa9.6□□□□□ -0.87
NPHP1-207ENST00000445609 EBNA1BP2Q99848 306 aaKnown RBP9.6□□□□□ -0.87
NPHP1-207ENST00000445609 WDR83Q9BRX9 315 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms