RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RGRP47804 291 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 CSNK1DP48730 415 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 MARCKSL1P49006 195 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 SCNN1BP51168 640 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 TAS2R38P59533 333 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 PPP2CBP62714 309 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 PPP2CAP67775 309 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 NSUN2Q08J23 767 aaKnown RBP eCLIP24.23■■□□□ 1.47
C9orf3-207ENST00000445181 KAZNQ674X7 775 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 SPOCD1Q6ZMY3 1216 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 SYCE1Q8N0S2 351 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 PAF1Q8N7H5 531 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 PLD5Q8N7P1 536 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 KRT35Q92764 455 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 RBM41Q96IZ5 413 aaKnown RBP24.23■■□□□ 1.47
C9orf3-207ENST00000445181 TSGA10Q9BZW7 698 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 ATP13A3Q9H7F0 1226 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 DNAAF2Q9NVR5 837 aaKnown RBP24.23■■□□□ 1.47
C9orf3-207ENST00000445181 DTLQ9NZJ0 730 aa24.23■■□□□ 1.47
C9orf3-207ENST00000445181 TPX2Q9ULW0 747 aaKnown RBP24.23■■□□□ 1.47
C9orf3-207ENST00000445181 ASCC3Q8N3C0 2202 aaKnown RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 UPK3BL1B0FP48 263 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 UPK3BL2E5RIL1 263 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 RNGTTO60942 597 aaKnown RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 PEX11BO96011 259 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 XPAP23025 273 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 CTNNA1P35221 906 aaKnown RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 HSPA9P38646 679 aaKnown RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 SLC10A2Q12908 348 aaPredicted RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 GRIK2Q13002 908 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 TFDP2Q14188 446 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 LLGL1Q15334 1064 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 PIP4P1Q86T03 277 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 PRPF39Q86UA1 669 aaKnown RBP24.22■■□□□ 1.47
C9orf3-207ENST00000445181 C1orf216Q8TAB5 229 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 TUBGCP5Q96RT8 1024 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 ZDHHC5Q9C0B5 715 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 ANGPTL2Q9UKU9 493 aa24.22■■□□□ 1.47
C9orf3-207ENST00000445181 A0A1W2PPC4 97 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 NEMP1O14524 444 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 MUSKO15146 869 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 KRT10P13645 584 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 CCNCP24863 283 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 SERPINA4P29622 427 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 AFF3P51826 1226 aaKnown RBP24.21■■□□□ 1.47
C9orf3-207ENST00000445181 BCL2L1Q07817 233 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 TFDP3Q5H9I0 405 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 NEK5Q6P3R8 708 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 PEX26Q7Z412 305 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 TTC7BQ86TV6 843 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 TRIM69Q86WT6 500 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 LRRC57Q8N9N7 239 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 EXD1Q8NHP7 514 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 LRRN4Q8WUT4 740 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 RAB7BQ96AH8 199 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 SUV39H2Q9H5I1 410 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 AMFRQ9UKV5 643 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 PCDHA3Q9Y5H8 950 aa24.21■■□□□ 1.47
C9orf3-207ENST00000445181 A0A1W2PQU0 124 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 CCDC66A2RUB6 948 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 MATN3O15232 486 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 KRT86O43790 486 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 CST8O60676 142 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 CD59P13987 128 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 AP1S1P61966 158 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 ITKQ08881 620 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 HNRNPDQ14103 355 aaKnown RBP24.2■■□□□ 1.46
C9orf3-207ENST00000445181 TEAD4Q15561 434 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 NPNTQ6UXI9 565 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 ADAT2Q7Z6V5 191 aaKnown RBP24.2■■□□□ 1.46
C9orf3-207ENST00000445181 CAMK1DQ8IU85 385 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 CCDC13Q8IYE1 715 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 VOPP1Q96AW1 172 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 HDAC11Q96DB2 347 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 ZNF641Q96N77 438 aaPredicted RBP24.2■■□□□ 1.46
C9orf3-207ENST00000445181 TSGA13Q96PP4 275 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 TM9SF3Q9HD45 589 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 NT5MQ9NPB1 228 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 SCUBE2Q9NQ36 999 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 AASDHPPTQ9NRN7 309 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 HAUS2Q9NVX0 235 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 DKK3Q9UBP4 350 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 GUCA1BQ9UMX6 200 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 FADS3Q9Y5Q0 445 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 SLCO1B1Q9Y6L6 691 aa24.2■■□□□ 1.46
C9orf3-207ENST00000445181 TTC24A2A3L6 582 aaPredicted RBP24.19■■□□□ 1.46
C9orf3-207ENST00000445181 GJB3O75712 270 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 CCDC175P0C221 793 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 CTNNA2P26232 953 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 ABL2P42684 1182 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 RWDD2BP57060 319 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 MAXP61244 160 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 SHC2P98077 582 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 AP1B1Q10567 949 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 PDK1Q15118 436 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 TAZQ16635 292 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 SETMARQ53H47 684 aaPredicted RBP24.19■■□□□ 1.46
C9orf3-207ENST00000445181 LRRC73Q5JTD7 316 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 HORMAD1Q86X24 394 aa24.19■■□□□ 1.46
C9orf3-207ENST00000445181 PGBD5Q8N414 524 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms