RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PIGNO95427 931 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 TIMP2P16035 220 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 IL1R2P27930 398 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 RABIFP47224 123 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 DNAJC3Q13217 504 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 DPYSQ14117 519 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 KYAT3Q6YP21 454 aaKnown RBP20.31■□□□□ 0.84
LRCH3-208ENST00000443727 CCNI2Q6ZMN8 369 aaPredicted RBP20.31■□□□□ 0.84
LRCH3-208ENST00000443727 LZTR1Q8N653 840 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 NPWQ8N729 165 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 BTBD6Q96KE9 485 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 BMFQ96LC9 184 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 LENG8Q96PV6 779 aaPredicted RBP20.31■□□□□ 0.84
LRCH3-208ENST00000443727 WRAP53Q9BUR4 548 aaKnown RBP20.31■□□□□ 0.84
LRCH3-208ENST00000443727 C1QTNF7Q9BXJ2 289 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 TSPY26PQ9H489 355 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 ZMIZ1Q9ULJ6 1067 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 TRPM6Q9BX84 2022 aa20.31■□□□□ 0.84
LRCH3-208ENST00000443727 POM121BA6NF01 834 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 MYO1FO00160 1098 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 KRT37O76014 449 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 DKK1O94907 266 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 CYP1A2P05177 515 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 TCF4P15884 667 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 SUOXP51687 545 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 ELP6Q0PNE2 266 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 KRT81Q14533 505 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 DPYSL2Q16555 572 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 TSR1Q2NL82 804 aaKnown RBP20.3■□□□□ 0.84
LRCH3-208ENST00000443727 AFMIDQ63HM1 303 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 TMCO3Q6UWJ1 677 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 DHRS13Q6UX07 377 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 TMPRSS7Q7RTY8 843 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 ARHGAP12Q8IWW6 846 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 SLC22A18ASQ8N1D0 253 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 ASB12Q8WXK4 309 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 VOPP1Q96AW1 172 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 SUV39H2Q9H5I1 410 aa20.3■□□□□ 0.84
LRCH3-208ENST00000443727 ZNHIT6Q9NWK9 470 aaKnown RBP20.3■□□□□ 0.84
LRCH3-208ENST00000443727 FFAR2O15552 330 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 SPINT1O43278 529 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 RFPL3O75679 317 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 TM7SF2O76062 418 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 TPM1P09493 284 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 RARAP10276 462 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 AMPD1P23109 780 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 DGKAP23743 735 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 SERPINA4P29622 427 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 EIF4A3P38919 411 aaKnown RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 IL10RBQ08334 325 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 PDE1CQ14123 709 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 RFTN1Q14699 578 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 ZNF542PQ5EBM4 170 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 SPECC1LQ69YQ0 1117 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 ERAP2Q6P179 960 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 ARHGAP36Q6ZRI8 547 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 KANSL1Q7Z3B3 1105 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 POLNQ7Z5Q5 900 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 SRLQ86TD4 932 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 NIPA2Q8N8Q9 360 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 TSEN2Q8NCE0 465 aaKnown RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 DENND6BQ8NEG7 585 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 HCAR2Q8TDS4 363 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 IFT43Q96FT9 208 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 ZNF641Q96N77 438 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 TUBGCP5Q96RT8 1024 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 KLF6Q99612 283 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 DEF6Q9H4E7 631 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 ATP13A3Q9H7F0 1226 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 CTTNBP2NLQ9P2B4 639 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 PCDHGA1Q9Y5H4 931 aa20.29■□□□□ 0.84
LRCH3-208ENST00000443727 KMT2BQ9UMN6 2715 aaPredicted RBP20.29■□□□□ 0.84
LRCH3-208ENST00000443727 H3BM21 787 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 C1SP09871 688 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 CDK4P11802 303 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 ITIH2P19823 946 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 THOP1P52888 689 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 TRIM14Q14142 442 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 HADHQ16836 314 aaKnown RBP20.28■□□□□ 0.84
LRCH3-208ENST00000443727 BRAT1Q6PJG6 821 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 CAMK1DQ8IU85 385 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 SLC25A45Q8N413 288 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 OR8K1Q8NGG5 319 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 TEKT4Q8WW24 435 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 CSPG4P5Q96PW8 444 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 UCKL1Q9NWZ5 548 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 SEPT3Q9UH03 358 aa20.28■□□□□ 0.84
LRCH3-208ENST00000443727 SPTY2D1-AS1A0A0U1RR47 76 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 FAM149AA5PLN7 773 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 NEMP2A6NFY4 417 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 TRIM38O00635 465 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 SIGLEC6O43699 453 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 BUB1BO60566 1050 aaPredicted RBP20.27■□□□□ 0.84
LRCH3-208ENST00000443727 PIAS2O75928 621 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 ALPPL2P10696 532 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 CKMT2P17540 419 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 CSNK1DP48730 415 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 ACADVLP49748 655 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 RENBPP51606 427 aa20.27■□□□□ 0.84
LRCH3-208ENST00000443727 HNRNPKP61978 463 aaKnown RBP eCLIP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms