RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 APOBEC2Q9Y235 224 aaKnown RBP21.31■■□□□ 1
CDKN3-204ENST00000442975 A6NNZ2 444 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 AKR1B15C9JRZ8 316 aaPredicted RBP21.3■■□□□ 1
CDKN3-204ENST00000442975 SDC3O75056 442 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 PROSCO94903 275 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 TRIM16O95361 564 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 PAK4O96013 591 aaPredicted RBP21.3■■□□□ 1
CDKN3-204ENST00000442975 TMEM253P0C7T8 217 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 SERPINB6P35237 376 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 ZFYVE27Q5T4F4 411 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 TMCO4Q5TGY1 634 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 DBX2Q6ZNG2 339 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 CHCHD4Q8N4Q1 142 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 CXorf40AQ8TE69 158 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 SAP25Q8TEE9 199 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 WRAP53Q9BUR4 548 aaKnown RBP21.3■■□□□ 1
CDKN3-204ENST00000442975 ERVMER34-1Q9H9K5 563 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 DKK3Q9UBP4 350 aa21.3■■□□□ 1
CDKN3-204ENST00000442975 TPRP12270 2363 aaKnown RBP21.29■■□□□ 1
CDKN3-204ENST00000442975 AREL1O15033 823 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 RAD51BO15315 384 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 CD48P09326 243 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 ITIH2P19823 946 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 MMRN1Q13201 1228 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 ZNF235Q14590 738 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 RFTN1Q14699 578 aaPredicted RBP21.29■■□□□ 1
CDKN3-204ENST00000442975 SARM1Q6SZW1 724 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 GLRX5Q86SX6 157 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 ZSCAN30Q86W11 494 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 CPEB1Q9BZB8 566 aaKnown RBP21.29■■□□□ 1
CDKN3-204ENST00000442975 ATP13A3Q9H7F0 1226 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 SEPT3Q9UH03 358 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 KLK13Q9UKR3 277 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 WASF3Q9UPY6 502 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 KNL1Q8NG31 2342 aa21.29■■□□□ 1
CDKN3-204ENST00000442975 MMP20O60882 483 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 ATXN1LP0C7T5 689 aaKnown RBP21.28■■□□□ 1
CDKN3-204ENST00000442975 TIMP2P16035 220 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 SERPINA4P29622 427 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 LBRQ14739 615 aaKnown RBP21.28■■□□□ 1
CDKN3-204ENST00000442975 GRM3Q14832 879 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 KYAT3Q6YP21 454 aaKnown RBP21.28■■□□□ 1
CDKN3-204ENST00000442975 Q6ZSR6 202 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 ABI3BPQ7Z7G0 1075 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 SRLQ86TD4 932 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 CAMK1DQ8IU85 385 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 SLC22A18ASQ8N1D0 253 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 EID2Q8N6I1 236 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 TSC1Q92574 1164 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 SUV39H2Q9H5I1 410 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 RCOR3Q9P2K3 495 aaPredicted RBP21.28■■□□□ 1
CDKN3-204ENST00000442975 CHD5Q8TDI0 1954 aa21.28■■□□□ 1
CDKN3-204ENST00000442975 FPGTO14772 594 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 MUSKO15146 869 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 PRKCGP05129 697 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 RXRGP48443 463 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 TAS2R40P59535 323 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 SLC10A7Q0GE19 358 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 BNIP3Q12983 259 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 DPYSL3Q14195 570 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 MESDQ14696 234 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 ATP13A4Q4VNC1 1196 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 ERAP2Q6P179 960 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 KDM7AQ6ZMT4 941 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 KCTD6Q8NC69 237 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 NSMCE1Q8WV22 266 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 ZNF641Q96N77 438 aaPredicted RBP21.27■■□□□ 1
CDKN3-204ENST00000442975 TUBGCP5Q96RT8 1024 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 C1QTNF2Q9BXJ5 285 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 PCDH12Q9NPG4 1184 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 LCMT1Q9UIC8 334 aa21.27■■□□□ 1
CDKN3-204ENST00000442975 POM121BA6NF01 834 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 TNFSF14O43557 240 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 MFSD11O43934 449 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 BUB1BO60566 1050 aaPredicted RBP21.26■□□□□ 0.99
CDKN3-204ENST00000442975 KRT7P08729 469 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 MAN1A1P33908 653 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 SCNN1BP51168 640 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 BCL2L1Q07817 233 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 ELP6Q0PNE2 266 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 TBX2Q13207 712 aaPredicted RBP21.26■□□□□ 0.99
CDKN3-204ENST00000442975 BRAT1Q6PJG6 821 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 RAB44Q7Z6P3 723 aaPredicted RBP21.26■□□□□ 0.99
CDKN3-204ENST00000442975 SLCO6A1Q86UG4 719 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 CNDP2Q96KP4 475 aaKnown RBP21.26■□□□□ 0.99
CDKN3-204ENST00000442975 ZNF599Q96NL3 588 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 PSKH2Q96QS6 385 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 C1QTNF7Q9BXJ2 289 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 DNAJC28Q9NX36 388 aa21.26■□□□□ 0.99
CDKN3-204ENST00000442975 TSPAN11A1L157 253 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 TM7SF2O76062 418 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 RABIFP47224 123 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 CSNK1DP48730 415 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 RENBPP51606 427 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 AP1S1P61966 158 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 SEMG2Q02383 582 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 UGP2Q16851 508 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 ZNF542PQ5EBM4 170 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 ZSWIM9Q86XI8 627 aa21.25■□□□□ 0.99
CDKN3-204ENST00000442975 BBS5Q8N3I7 341 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms