RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 EARS2Q5JPH6 523 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZNF658Q5TYW1 1059 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ARHGEF16Q5VV41 709 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MFSD5Q6N075 450 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CGB2Q6NT52 195 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DHRS4L2Q6PKH6 230 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 UNC5AQ6ZN44 842 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 DSG4Q86SJ6 1040 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 GALNT13Q8IUC8 556 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 HERC6Q8IVU3 1022 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 OR10Z1Q8NGY1 313 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 GRK7Q8WTQ7 553 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TRIM43Q96BQ3 446 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ALKBH8Q96BT7 664 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 TBC1D20Q96BZ9 403 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ARMC5Q96C12 935 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 OXNAD1Q96HP4 312 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 TTYH2Q9BSA4 534 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 COPS4Q9BT78 406 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 LSM14BQ9BX40 385 aaKnown RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 MROQ9BYG7 248 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 LIN7BQ9HAP6 207 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CYP26B1Q9NR63 512 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 RNF146Q9NTX7 359 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 ZSWIM5Q9P217 1185 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MARCOQ9UEW3 520 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 ADAMTS6Q9UKP5 1117 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.81□□□□□ -1.967e-9■■■■■ 38.5
LIG4-203ENST00000442234 AGTPBP1Q9UPW5 1226 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 INVSQ9Y283 1065 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 B3GNT3Q9Y2A9 372 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 TBC1D30Q9Y2I9 924 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PRG3Q9Y2Y8 225 aaPredicted RBP2.81□□□□□ -1.96
LIG4-203ENST00000442234 MAU2Q9Y6X3 613 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 MYH1P12882 1939 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 PCM1Q15154 2024 aa2.81□□□□□ -1.96
LIG4-203ENST00000442234 CEMIPQ8WUJ3 1361 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RIC1Q4ADV7 1423 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PNMA6FA0A0J9YX94 578 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 A0A1W2PRQ8 180 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KRT87PA6NCN2 255 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 OR6C65A6NJZ3 312 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 OR5K4A6NMS3 321 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 A8MV72 311 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 BTBD18B2RXH4 712 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 BTN3A3O00478 584 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CHL1O00533 1208 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NFIBO00712 420 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TOR1BO14657 336 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TM9SF1O15321 606 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ST8SIA5O15466 376 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RFPL2O75678 378 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RHOBTB3O94955 611 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KCNH1O95259 989 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ECDO95905 644 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 BMP15O95972 392 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 YES1P07947 543 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 H2AFZP0C0S5 128 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CLEC2LP0C7M8 214 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 TXNP10599 105 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 FDPSP14324 419 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 KELP23276 732 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 IL12AP29459 219 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PRDX6P30041 224 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 CCND2P30279 289 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MAPK4P31152 587 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FMO4P31512 558 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 KCNJ5P48544 419 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PRIM2P49643 509 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RGS19P49795 217 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ERVK-21P61565 698 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 MRPS22P82650 360 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 KRR1Q13601 381 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 RRP1BQ14684 758 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 NAB2Q15742 525 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZNF124Q15973 351 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PDK4Q16654 411 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FAM214AQ32MH5 1076 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 AASDHQ4L235 1098 aaPredicted RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 PAGE2BQ5JRK9 111 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 RNASEH2BQ5TBB1 312 aaKnown RBP2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZNF544Q6NX49 715 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ERAP2Q6P179 960 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 PLEKHG7Q6ZR37 379 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 BEND4Q6ZU67 534 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 USP49Q70CQ1 688 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 H2AFVQ71UI9 128 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ADGRG6Q86SQ4 1221 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ADAMTSL2Q86TH1 951 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NLRX1Q86UT6 975 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 NT5DC4Q86YG4 428 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 SNX29P2Q8IUI4 249 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LINC00518Q8N0U6 118 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FBXL6Q8N531 539 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ZNF565Q8N9K5 539 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FAM47BQ8NA70 645 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 FANCBQ8NB91 859 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 LHFPL5Q8TAF8 219 aa2.8□□□□□ -1.96
LIG4-203ENST00000442234 ENKURQ8TC29 256 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms