RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 LHX3Q9UBR4 397 aa18.4■□□□□ 0.54
GTF3A-204ENST00000438571 APOBEC3BQ9UH17 382 aaKnown RBP18.4■□□□□ 0.54
GTF3A-204ENST00000438571 HPCAL4Q9UM19 191 aa18.4■□□□□ 0.54
GTF3A-204ENST00000438571 GCN1Q92616 2671 aaKnown RBP18.4■□□□□ 0.54
GTF3A-204ENST00000438571 ZFC3H1O60293 1989 aaKnown RBP18.39■□□□□ 0.53
GTF3A-204ENST00000438571 CREB3O43889 395 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 POP4O95707 220 aaKnown RBP18.39■□□□□ 0.53
GTF3A-204ENST00000438571 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
GTF3A-204ENST00000438571 RHOAP61586 193 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 TCEA2Q15560 299 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 FKBP15Q5T1M5 1219 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 SCYL2Q6P3W7 929 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 RBM43Q6ZSC3 357 aaKnown RBP18.39■□□□□ 0.53
GTF3A-204ENST00000438571 PHACTR4Q8IZ21 702 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 ASB12Q8WXK4 309 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 GDAP1L1Q96MZ0 367 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 MCEEQ96PE7 176 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 EPAS1Q99814 870 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 OSBPL1AQ9BXW6 950 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 TTYH3Q9C0H2 523 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 CLPBQ9H078 707 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 GPATCH2LQ9NWQ4 482 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 FZD10Q9ULW2 581 aa18.39■□□□□ 0.53
GTF3A-204ENST00000438571 ATMQ13315 3056 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 EME2A4GXA9 379 aaPredicted RBP18.38■□□□□ 0.53
GTF3A-204ENST00000438571 EIF4E1BA6NMX2 242 aaKnown RBP18.38■□□□□ 0.53
GTF3A-204ENST00000438571 RASA4BC9J798 803 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 RASA4O43374 803 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 IGSF6O95976 241 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 TIMP2P16035 220 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 IRF4Q15306 451 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 CYTH1Q15438 398 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 KLHL40Q2TBA0 621 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 PRRT3Q5FWE3 981 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 C3orf38Q5JPI3 329 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 EFHC2Q5JST6 749 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 PPP1R15BQ5SWA1 713 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 DNAJC24Q6P3W2 148 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 PCSK4Q6UW60 755 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 APTXQ7Z2E3 356 aaKnown RBP18.38■□□□□ 0.53
GTF3A-204ENST00000438571 TTC7BQ86TV6 843 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 ZSCAN30Q86W11 494 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 DNAAF5Q86Y56 855 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 SLC35F3Q8IY50 421 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 NEK11Q8NG66 645 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 SLC39A7Q92504 469 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 HIC2Q96JB3 615 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 PCMTD1Q96MG8 357 aaPredicted RBP18.38■□□□□ 0.53
GTF3A-204ENST00000438571 LGMNQ99538 433 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 HSD3B7Q9H2F3 369 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 RETREG1Q9H6L5 497 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 ASCL3Q9NQ33 180 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 TAS2R14Q9NYV8 317 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 SATB2Q9UPW6 733 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 CSNK1G3Q9Y6M4 447 aa18.38■□□□□ 0.53
GTF3A-204ENST00000438571 SIGLEC16A6NMB1 481 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 LGALS16A8MUM7 142 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 MUSKO15146 869 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ATXN7O15265 892 aaPredicted RBP18.37■□□□□ 0.53
GTF3A-204ENST00000438571 TM7SF2O76062 418 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 PRKCGP05129 697 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 CALB1P05937 261 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 DUSP3P51452 185 aaPredicted RBP18.37■□□□□ 0.53
GTF3A-204ENST00000438571 THOP1P52888 689 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ADKP55263 362 aaKnown RBP18.37■□□□□ 0.53
GTF3A-204ENST00000438571 CXADRP78310 365 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 SERINC3Q13530 473 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ISXQ2M1V0 245 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 KCTD16Q68DU8 428 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ZSWIM9Q86XI8 627 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 CXorf40AQ8TE69 158 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ATXN7L3BQ96GX2 97 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 IL12RB2Q99665 862 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 AGPAT1Q99943 283 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 BOCQ9BWV1 1114 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ABCG4Q9H172 646 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 POLR1BQ9H9Y6 1135 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 PDFQ9HBH1 243 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 USP29Q9HBJ7 922 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 LIMA1Q9UHB6 759 aaKnown RBP18.37■□□□□ 0.53
GTF3A-204ENST00000438571 SALL4Q9UJQ4 1053 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ENTPD2Q9Y5L3 495 aa18.37■□□□□ 0.53
GTF3A-204ENST00000438571 ZSCAN5CA6NGD5 496 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 WASH4PA8MWX3 477 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 LZTS3O60299 673 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 EIF4A3P38919 411 aaKnown RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 RGRP47804 291 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 ZNF143P52747 638 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 PDX1P52945 283 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 PCBP4P57723 403 aaKnown RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 MACC1Q6ZN28 852 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 ZNF248Q8NDW4 579 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 ARHGEF26Q96DR7 871 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 CELF6Q96J87 481 aaKnown RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 ZNF578Q96N58 590 aaPredicted RBP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.36■□□□□ 0.53
GTF3A-204ENST00000438571 CPNE5Q9HCH3 593 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 SPASTQ9UBP0 616 aa18.36■□□□□ 0.53
GTF3A-204ENST00000438571 J3KR12 359 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 TPP1O14773 563 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms