RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ACVR1CQ8NER5 493 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 PEX13Q92968 403 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 C20orf27Q9GZN8 174 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 NMRAL1Q9HBL8 299 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 ZNF358Q9NW07 568 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 AGO1Q9UL18 857 aaKnown RBP25.94■■□□□ 1.74
CPNE1-216ENST00000437340 TBC1D30Q9Y2I9 924 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 INSL5Q9Y5Q6 135 aa25.94■■□□□ 1.74
CPNE1-216ENST00000437340 C2orf78A6NCI8 922 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 F7P08709 466 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-216ENST00000437340 OXCT1P55809 520 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 ZNF470Q6ECI4 717 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 CYB5D1Q6P9G0 228 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 RAPH1Q70E73 1250 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 ITIH5Q86UX2 942 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 LMNTD2Q8IXW0 634 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 OR7D4Q8NG98 312 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 OR6Y1Q8NGX8 325 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 RDH11Q8TC12 318 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 SREK1Q8WXA9 508 aaKnown RBP25.93■■□□□ 1.74
CPNE1-216ENST00000437340 IFT43Q96FT9 208 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 TSNARE1Q96NA8 513 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 PSKH2Q96QS6 385 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 KLC4Q9NSK0 619 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 FBXO5Q9UKT4 447 aa25.93■■□□□ 1.74
CPNE1-216ENST00000437340 MIA3Q5JRA6 1907 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 MUSKO15146 869 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 SLC7A4O43246 635 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 SERPINF2P08697 491 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 RALBP11234 206 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 CRABP2P29373 138 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 SLC1A6P48664 564 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 RASSF2P50749 326 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 MPP1Q00013 466 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 IRF9Q00978 393 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 TBC1D1Q86TI0 1168 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-216ENST00000437340 WWP1Q9H0M0 922 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 UBA2Q9UBT2 640 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-216ENST00000437340 MYLKQ15746 1914 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 RHOCP08134 193 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 HTRA4P83105 476 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-216ENST00000437340 ILF2Q12905 390 aaKnown RBP25.92■■□□□ 1.74
CPNE1-216ENST00000437340 CTC1Q2NKJ3 1217 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 PABPC1LQ4VXU2 614 aaKnown RBP25.92■■□□□ 1.74
CPNE1-216ENST00000437340 FAM91A1Q658Y4 838 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 OR52K2Q8NGK3 314 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 OR13J1Q8NGT2 312 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 INPP5DQ92835 1189 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 C1QTNF1Q9BXJ1 281 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 ACE2Q9BYF1 805 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-216ENST00000437340 LRMDAQ9H2I8 198 aa25.92■■□□□ 1.74
CPNE1-216ENST00000437340 FAM95CA0A1B0GW59 222 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 G3V2L1 256 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 LILRB3O75022 631 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 H2AFYO75367 372 aaKnown RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 STMN1P16949 149 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 SERPINB3P29508 390 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 RAB10P61026 200 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 ELF3P78545 371 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 ZBTB16Q05516 673 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 ZNF783Q6ZMS7 281 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 TMEM150AQ86TG1 271 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 WDR75Q8IWA0 830 aaKnown RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 PIWIL2Q8TC59 973 aaKnown RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 PPP4R1Q8TF05 950 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 HERVK_113Q902F9 699 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 SPON2Q9BUD6 331 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 STN1Q9H668 368 aaKnown RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 ZNF395Q9H8N7 513 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-216ENST00000437340 RIMKLBQ9ULI2 386 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 SSX2IPQ9Y2D8 614 aa25.91■■□□□ 1.74
CPNE1-216ENST00000437340 E2F8A0AVK6 867 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 TTC24A2A3L6 582 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 HAUS5O94927 633 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 F11P03951 625 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 SLC35E2BP0CK96 405 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 T-ENOLP0DO92 83 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 MBL2P11226 248 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 CES1P23141 567 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 LEPRP48357 1165 aaKnown RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 POU4F1Q01851 419 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 ABHD8Q96I13 439 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 CINPQ9BW66 212 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 MFSD1Q9H3U5 465 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 FAM96AQ9H5X1 160 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 ACOT9Q9Y305 439 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 ASB3Q9Y575 518 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 TRAFD1O14545 582 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 MGRN1O60291 552 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 TARSP26639 723 aaKnown RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 GMPRP36959 345 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 PRKAA2P54646 552 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 KCNJ2P63252 427 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 ACVR1Q04771 509 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 SLC41A1Q8IVJ1 513 aa25.9■■□□□ 1.74
CPNE1-216ENST00000437340 ZFRQ96KR1 1074 aaKnown RBP25.9■■□□□ 1.74
CPNE1-216ENST00000437340 TEX28O15482 410 aa25.89■■□□□ 1.73
CPNE1-216ENST00000437340 LDB2O43679 373 aa25.89■■□□□ 1.73
CPNE1-216ENST00000437340 ITM2AO43736 263 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms