RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SLC6A13Q9NSD5 602 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 ANKEF1Q9NU02 776 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 CTNNAL1Q9UBT7 734 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 SEL1LQ9UBV2 794 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 CHORDC1Q9UHD1 332 aaPredicted RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 DMRT1Q9Y5R6 373 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 NCANO14594 1321 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 AOX1Q06278 1338 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 WDR33Q9C0J8 1336 aaKnown RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 DDTLA6NHG4 134 aaPredicted RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 SNAP23O00161 211 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 CYR61O00622 381 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 SEC14L5O43304 696 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 PLOD3O60568 738 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 SEC31AO94979 1220 aaKnown RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 UNGP13051 313 aaPredicted RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 ENO3P13929 434 aaPredicted RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 TM4SF1P30408 202 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 GCH1P30793 250 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 NNMTP40261 264 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 HADHAP40939 763 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 PIK3CAP42336 1068 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 HDAC4P56524 1084 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 ZXDAP98168 799 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 GAD2Q05329 585 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 STK4Q13043 487 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 FAM133BQ5BKY9 247 aaKnown RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 TBC1D9BQ66K14 1250 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 HMBOX1Q6NT76 420 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 FAM83HQ6ZRV2 1179 aaPredicted RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 CHST9Q7L1S5 443 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 GALNT5Q7Z7M9 940 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 GALNT16Q8N428 558 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 LRRC57Q8N9N7 239 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 SLC44A5Q8NCS7 719 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 OR4N2Q8NGD1 307 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 GPR150Q8NGU9 434 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 PSPC1Q8WXF1 523 aaKnown RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 HARBI1Q96MB7 349 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 TEX12Q9BXU0 123 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 CDT1Q9H211 546 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 AAMDCQ9H7C9 122 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 KIF9Q9HAQ2 790 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 MLXIPLQ9NP71 852 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 AGO2Q9UKV8 859 aaKnown RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 CAPN7Q9Y6W3 813 aa6.23□□□□□ -1.41
USP54-206ENST00000433394 POLR2AP24928 1970 aaKnown RBP6.23□□□□□ -1.41
USP54-206ENST00000433394 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 TRBV5-7A0A0A0MS05 114 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 SCAMP1O15126 338 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 LIASO43766 372 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 NUDT3O95989 172 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 RB1P06400 928 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 AKR1B1P15121 316 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 CTPS1P17812 591 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 PIP4K2AP48426 406 aaPredicted RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 MRPL12P52815 198 aaKnown RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 ZNF91Q05481 1191 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 SLC18A2Q05940 514 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 LRMPQ12912 555 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 PRPF4BQ13523 1007 aaKnown RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 DRAP1Q14919 205 aaPredicted RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 PLEKHO1Q53GL0 409 aaPredicted RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 ENTPD8Q5MY95 495 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 C6orf10Q5SRN2 563 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 KDELC2Q7Z4H8 507 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 PALB2Q86YC2 1186 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 TDRPQ86YL5 185 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP54-206ENST00000433394 CADM3Q8N126 398 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 LSMEM1Q8N8F7 131 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 PERPQ96FX8 193 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 C1orf74Q96LT6 269 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 SLF1Q9BQI6 1058 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 WDR6Q9NNW5 1121 aaKnown RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 KLHL13Q9P2N7 655 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 PCDHGB4Q9UN71 923 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 RPS6KL1Q9Y6S9 549 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 SETD1BQ9UPS6 1966 aaKnown RBP6.22□□□□□ -1.41
USP54-206ENST00000433394 ADGRF5Q8IZF2 1346 aa6.22□□□□□ -1.41
USP54-206ENST00000433394 MANSC4A6NHS7 340 aaPredicted RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 PPP6CO00743 305 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 ZNF182P17025 639 aaPredicted RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 EIF2DP41214 584 aaKnown RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 CFHR1Q03591 330 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 ARHGEF6Q15052 776 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 NAB2Q15742 525 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 MIDNQ504T8 468 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 DCAF6Q58WW2 860 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 GKAP1Q5VSY0 366 aaPredicted RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 FBXO42Q6P3S6 717 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 ANKRD13BQ86YJ7 626 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 DENND6AQ8IWF6 608 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 FAM217AQ8IXS0 508 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 TMTC2Q8N394 836 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 HORMAD2Q8N7B1 307 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 GJC3Q8NFK1 279 aa6.21□□□□□ -1.42
USP54-206ENST00000433394 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.21□□□□□ -1.42
USP54-206ENST00000433394 FBXL8Q96CD0 374 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms