RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 FSCBQ5H9T9 825 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 DET1Q7L5Y6 550 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 SLC26A11Q86WA9 606 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 MMAAQ8IVH4 418 aaKnown RBP10.75□□□□□ -0.69
TCOF1-204ENST00000427724 ARMC5Q96C12 935 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 CPXM1Q96SM3 734 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 BPIFA1Q9NP55 256 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 WWOXQ9NZC7 414 aa10.75□□□□□ -0.69
TCOF1-204ENST00000427724 TGM5O43548 720 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PRNPP04156 253 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ASGR2P07307 311 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 FDFT1P37268 417 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 MAPK8P45983 427 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PXNP49023 591 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 UBE3AQ05086 875 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 EIF2B5Q13144 721 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PDK4Q16654 411 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 IYDQ6PHW0 289 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 NPNTQ6UXI9 565 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 CCNJLQ8IV13 435 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 HID1Q8IV36 788 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 DDIASQ8IXT1 998 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 KLHDC9Q8NEP7 349 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 SERPINI1Q99574 410 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ZBTB18Q99592 522 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ADAMTS10Q9H324 1103 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ERVW-1Q9UQF0 538 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PIAS3Q9Y6X2 628 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 A0A1B0GVM2 712 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 TCAF2A6NFQ2 919 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 NCF1BA6NI72 391 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 NCF1CA8MVU1 366 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 TM9SF1O15321 606 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 HNRNPRO43390 633 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 EDIL3O43854 480 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 RASGRP1O95267 797 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 GLP2RO95838 553 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 NCF1P14598 390 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 KCNE1P15382 129 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 GOT1P17174 413 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 WARSP23381 471 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ADRA1BP35368 520 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 BNIP1Q12981 228 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ZBTB17Q13105 803 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 SLC1A5Q15758 541 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 FAM187BQ17R55 369 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PTPN20Q4JDL3 420 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ANKRD20A4Q4UJ75 823 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 BRMS1LQ5PSV4 323 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ZCCHC23Q6ZST2 131 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ZC3H3Q8IXZ2 948 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PLEKHO2Q8TD55 490 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 CYB5D2Q8WUJ1 264 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 TSPAN17Q96FV3 270 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 COPS7BQ9H9Q2 264 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ZFP37Q9Y6Q3 630 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 CPED1A4D0V7 1026 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 SMAPO00193 183 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 LIN7AO14910 233 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 GPR32O75388 356 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 SLC25A14O95258 325 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 EIF2S1P05198 315 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 PSMC3P17980 439 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 RPL22P35268 128 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 HSPA14Q0VDF9 509 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 MMRN1Q13201 1228 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 CRTC3Q6UUV7 619 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 OR10G6Q8NH81 332 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 MRPL46Q9H2W6 279 aaKnown RBP10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ASB8Q9H765 288 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 ACTL7BQ9Y614 415 aa10.74□□□□□ -0.69
TCOF1-204ENST00000427724 KLHL33A6NCF5 533 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 RNF103O00237 685 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 ZNF143P52747 638 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 CREB5Q02930 508 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 WASHC5Q12768 1159 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 HIST2H2ACQ16777 129 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 HIST2H2AA3Q6FI13 130 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 ZNF852Q6ZMS4 543 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 ACAD11Q709F0 780 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 HTR3CQ8WXA8 447 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 ABCG8Q9H221 673 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 EPS15L1Q9UBC2 864 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 TSC22D4Q9Y3Q8 395 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 KANSL1LA0AUZ9 987 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 AIM2O14862 343 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 H2AFYO75367 372 aaKnown RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 PABPC1P11940 636 aaKnown RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 EEF1B2P24534 225 aaKnown RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 RBL1P28749 1068 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 TMED10P49755 219 aaKnown RBP10.73□□□□□ -0.69
TCOF1-204ENST00000427724 KCNQ1P51787 676 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 RAP1GDS1P52306 607 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 FAM182AQ5T1J6 154 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 Q7L0L9 218 aa10.73□□□□□ -0.69
TCOF1-204ENST00000427724 SMG8Q8ND04 991 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms