RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 TRMT13Q9NUP7 481 aaKnown RBP5.93□□□□□ -1.46
C9orf3-205ENST00000427193 MRPS17Q9Y2R5 130 aaKnown RBP5.93□□□□□ -1.46
C9orf3-205ENST00000427193 KDM3AQ9Y4C1 1321 aa5.93□□□□□ -1.46
C9orf3-205ENST00000427193 MAP1BP46821 2468 aaKnown RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 SPTBN2O15020 2390 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 MED19A0JLT2 244 aaPredicted RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 MYMKA6NI61 221 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 MYO1CO00159 1063 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 PGK1P00558 417 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 MMP3P08254 477 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 CYP2A6P11509 494 aaPredicted RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 AKR1A1P14550 325 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 CYP11B2P19099 503 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 TCF7P36402 384 aaPredicted RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 CCT6AP40227 531 aaKnown RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 SLC11A2P49281 568 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 CDK7P50613 346 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 ACLYP53396 1101 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 POLGP54098 1239 aaPredicted RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 UCP3P55916 312 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 FHL1Q13642 323 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 MGAT5BQ3V5L5 792 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 COBLL1Q53SF7 1204 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 XKR3Q5GH77 459 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 ATAT1Q5SQI0 421 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 NCAPH2Q6IBW4 605 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 SERPINA13PQ6UXR4 307 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 ZNF517Q6ZMY9 492 aaPredicted RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 MIER3Q7Z3K6 550 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 AFG1LQ8WV93 481 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 HPS3Q969F9 1004 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 SPATA33Q96N06 139 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 CTAGE1Q96RT6 745 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 STRA6Q9BX79 667 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 TRIM9Q9C026 710 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 DHX33Q9H6R0 707 aaKnown RBP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 XPNPEP1Q9NQW7 623 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 ANKEF1Q9NU02 776 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 KCND2Q9NZV8 630 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.92□□□□□ -1.46
C9orf3-205ENST00000427193 SYNRGQ9UMZ2 1314 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 GPR179Q6PRD1 2367 aa5.92□□□□□ -1.46
C9orf3-205ENST00000427193 SCN10AQ9Y5Y9 1956 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PVALEFA0A1B0GWK0 134 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 MBLAC1A4D2B0 266 aaPredicted RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 GOLGA6L4A6NEF3 574 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 E9PMD0 336 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 DDX39AO00148 427 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ALDH2P05091 517 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 LGALS2P05162 132 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PLA2G4BP0C869 781 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 KCNA5P22460 613 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 YWHABP31946 246 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 RENBPP51606 427 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PRKCEQ02156 737 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CYP4A11Q02928 519 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CUL4BQ13620 913 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 MORC3Q14149 939 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CTTNQ14247 550 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 KCNB1Q14721 858 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 POSTNQ15063 836 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PLCB4Q15147 1175 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 HERC4Q5GLZ8 1057 aaPredicted RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 MARCH8Q5T0T0 291 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CCDC183Q5T5S1 534 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 RRAGBQ5VZM2 374 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 RINT1Q6NUQ1 792 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 SWSAP1Q6NVH7 229 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ZNF813Q6ZN06 617 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ASCL5Q7RTU5 278 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 TLK2Q86UE8 772 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 SESTD1Q86VW0 696 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ZNF280BQ86YH2 543 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 IZUMO1Q8IYV9 350 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CELF5Q8N6W0 485 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PDILTQ8N807 584 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ERMNQ8TAM6 284 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ATP8B4Q8TF62 1192 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ARNTL2Q8WYA1 636 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ATP6V0A1Q93050 837 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 DHX58Q96C10 678 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 RSPRY1Q96DX4 576 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 C1GALT1C1Q96EU7 318 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CALML4Q96GE6 196 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CGRRF1Q99675 332 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 NTPCRQ9BSD7 190 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PANK2Q9BZ23 570 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 CIPCQ9C0C6 399 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 MLXIPQ9HAP2 919 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PCDH12Q9NPG4 1184 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 PIH1D1Q9NWS0 290 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 TRNAU1APQ9NX07 287 aaKnown RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 ZHX1Q9UKY1 873 aaPredicted RBP5.91□□□□□ -1.46
C9orf3-205ENST00000427193 FAM50BQ9Y247 325 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 COL4A3BPQ9Y5P4 624 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 GRIN2DO15399 1336 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 FRYLO94915 3013 aa5.91□□□□□ -1.46
C9orf3-205ENST00000427193 A0A087WWV3 80 aa5.9□□□□□ -1.46
C9orf3-205ENST00000427193 TMEM150BA6NC51 233 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms