RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 CPEB1Q9BZB8 566 aaKnown RBP20.28■□□□□ 0.84
CCDC107-206ENST00000426546 LHX3Q9UBR4 397 aa20.28■□□□□ 0.84
CCDC107-206ENST00000426546 SHROOM3Q8TF72 1996 aa20.28■□□□□ 0.84
CCDC107-206ENST00000426546 H3BM21 787 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 SCAMP1O15126 338 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 FFAR2O15552 330 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 ATMINO43313 823 aaPredicted RBP20.27■□□□□ 0.84
CCDC107-206ENST00000426546 CSF2P04141 144 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 CKMT1AP12532 417 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 GZMAP12544 262 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 NME1P15531 152 aaKnown RBP20.27■□□□□ 0.84
CCDC107-206ENST00000426546 PSMA2P25787 234 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 PRKCIP41743 596 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 ZNF165P49910 485 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 SUOXP51687 545 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 PFN3P60673 137 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 DAB2P98082 770 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 E2F1Q01094 437 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 TARDBPQ13148 414 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCDC107-206ENST00000426546 GRM3Q14832 879 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 TTC7BQ86TV6 843 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 UBL7Q96S82 380 aaPredicted RBP20.27■□□□□ 0.84
CCDC107-206ENST00000426546 DUSP23Q9BVJ7 150 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 NRSN2Q9GZP1 204 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 HAUS4Q9H6D7 363 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 LRRC19Q9H756 370 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 PDFQ9HBH1 243 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 GPATCH2LQ9NWQ4 482 aa20.27■□□□□ 0.84
CCDC107-206ENST00000426546 UBA2Q9UBT2 640 aaPredicted RBP20.27■□□□□ 0.84
CCDC107-206ENST00000426546 LRRK1Q38SD2 2015 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 TMEM191CA6NGB0 347 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 TLX3O43711 291 aaPredicted RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 EIF2S3P41091 472 aaKnown RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 INSM1Q01101 510 aaPredicted RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 PDE1CQ14123 709 aaPredicted RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 ZNF542PQ5EBM4 170 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 ERMARDQ5T6L9 678 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 ZNF571Q7Z3V5 609 aaPredicted RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 DNAAF5Q86Y56 855 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 FAM181AQ8N9Y4 354 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 ZNF548Q8NEK5 533 aaPredicted RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 HCAR2Q8TDS4 363 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 FNIP1Q8TF40 1166 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 CENPTQ96BT3 561 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 C1QTNF7Q9BXJ2 289 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 EDEM3Q9BZQ6 932 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 DHX35Q9H5Z1 703 aaKnown RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 USP29Q9HBJ7 922 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 IPO11Q9UI26 975 aaKnown RBP20.26■□□□□ 0.83
CCDC107-206ENST00000426546 CSNK1G3Q9Y6M4 447 aa20.26■□□□□ 0.83
CCDC107-206ENST00000426546 EEF2KO00418 725 aaKnown RBP20.25■□□□□ 0.83
CCDC107-206ENST00000426546 PRAMEF11O60813 436 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 TM7SF2O76062 418 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 RNF8O76064 485 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 PRB1P04280 392 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 SEMG2Q02383 582 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 ELP6Q0PNE2 266 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 RTP5Q14D33 572 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 CYTH1Q15438 398 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 LRRC73Q5JTD7 316 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 E4F1Q66K89 784 aaPredicted RBP20.25■□□□□ 0.83
CCDC107-206ENST00000426546 PSTKQ8IV42 348 aaKnown RBP20.25■□□□□ 0.83
CCDC107-206ENST00000426546 ARFGAP1Q8N6T3 406 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 DCBLD1Q8N8Z6 715 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 CXorf40AQ8TE69 158 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 NCAPGQ9BPX3 1015 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 SNRNP25Q9BV90 132 aaKnown RBP20.25■□□□□ 0.83
CCDC107-206ENST00000426546 PRORYQ9H606 182 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 EVA1BQ9NVM1 165 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 CLCA2Q9UQC9 943 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 SCINQ9Y6U3 715 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 ANKRD36A6QL64 1941 aa20.25■□□□□ 0.83
CCDC107-206ENST00000426546 HELZ2Q9BYK8 2649 aaKnown RBP20.24■□□□□ 0.83
CCDC107-206ENST00000426546 TSPAN11A1L157 253 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 ARHGAP42A6NI28 874 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 K7ESM1 405 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 TOR1BO14657 336 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 RIOK3O14730 519 aaKnown RBP20.24■□□□□ 0.83
CCDC107-206ENST00000426546 MMP20O60882 483 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 FTLP02792 175 aaPredicted RBP20.24■□□□□ 0.83
CCDC107-206ENST00000426546 GP1BAP07359 652 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 TIMP2P16035 220 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 IGFALSP35858 605 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 DUSP3P51452 185 aaPredicted RBP20.24■□□□□ 0.83
CCDC107-206ENST00000426546 YPEL5P62699 121 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 KLHL30Q0D2K2 578 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 PTK2BQ14289 1009 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 CA9Q16790 459 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 NETO2Q8NC67 525 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 TRIM11Q96F44 468 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 EXOC2Q96KP1 924 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 APOLD1Q96LR9 279 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 NAP1L5Q96NT1 182 aaPredicted RBP20.24■□□□□ 0.83
CCDC107-206ENST00000426546 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 FUCA2Q9BTY2 467 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 CAAP1Q9H8G2 361 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 CNOT8Q9UFF9 292 aaKnown RBP20.24■□□□□ 0.83
CCDC107-206ENST00000426546 PCSK1NQ9UHG2 260 aa20.24■□□□□ 0.83
CCDC107-206ENST00000426546 LY6G6EA0A0G2JKS1 128 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms