RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ACTL7AQ9Y615 435 aa12.93□□□□□ -0.34
SGCE-203ENST00000425444 BZW2Q9Y6E2 419 aaKnown RBP12.93□□□□□ -0.34
SGCE-203ENST00000425444 CXorf51AA0A1B0GTR3 108 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 VILLO15195 856 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 FGF10O15520 208 aaPredicted RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 DAPK3O43293 454 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 BUB1O43683 1085 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 PRPSAP2O60256 369 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 PLXNA2O75051 1894 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 PBX1P40424 430 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 ZBED6P86452 979 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 INSM1Q01101 510 aaPredicted RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 SETMARQ53H47 684 aaPredicted RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 PIP5KL1Q5T9C9 394 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 ERN2Q76MJ5 926 aaKnown RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 TRIM69Q86WT6 500 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 CACTIN-AS1Q8N1I8 211 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 SAP25Q8TEE9 199 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 SNRNP27Q8WVK2 155 aaKnown RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 TRIM7Q9C029 511 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 DONSONQ9NYP3 566 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 HECAQ9UBI9 543 aaPredicted RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 DMTF1Q9Y222 760 aa12.92□□□□□ -0.34
SGCE-203ENST00000425444 LUC7L2Q9Y383 392 aaKnown RBP12.92□□□□□ -0.34
SGCE-203ENST00000425444 LRBAP50851 2863 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 A0A1W2PQU0 124 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 TMEM191CA6NGB0 347 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 RASA4BC9J798 803 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 EEF2KO00418 725 aaKnown RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 RASA4O43374 803 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 LATO43561 262 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 KDELR3O43731 214 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 ZNF821O75541 412 aaPredicted RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 TMCC1O94876 653 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 PCDH8O95206 1070 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 SERPING1P05155 500 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 MPOP05164 745 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 GP1BBP13224 206 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 HTR7P34969 479 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 NUDT1P36639 197 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 NEK3P51956 506 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 YBEYP58557 167 aaPredicted RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 SNRPD1P62314 119 aaKnown RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 STAT4Q14765 748 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 NFKBIBQ15653 356 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 PARP15Q460N3 678 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 ERMARDQ5T6L9 678 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 OR2AP1Q8NGE2 309 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 FNIP1Q8TF40 1166 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 RFFLQ8WZ73 363 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 SYN2Q92777 582 aaPredicted RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 ISG20Q96AZ6 181 aaKnown RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 HMCESQ96FZ2 354 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 MYOCQ99972 504 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
SGCE-203ENST00000425444 HDAC8Q9BY41 377 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 CAPN11Q9UMQ6 739 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 PCDHB1Q9Y5F3 818 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
SGCE-203ENST00000425444 WASH4PA8MWX3 477 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 EIF3CLB5ME19 914 aaKnown RBP12.9□□□□□ -0.34
SGCE-203ENST00000425444 RNF103O00237 685 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 KRIT1O00522 736 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 WNT9AO14904 365 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 MAGEC1O60732 1142 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 CD160O95971 181 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 IGSF6O95976 241 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 GSRP00390 522 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 MT-CO3P00414 261 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 WNT1P04628 370 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 GYPCP04921 128 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 PRLRP16471 622 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 CKMT2P17540 419 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 ITGB7P26010 798 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 MIPP30301 263 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 TAS2R38P59533 333 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 RHOAP61586 193 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 GABREP78334 506 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 SHBQ15464 509 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 CA9Q16790 459 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 PPP6R3Q5H9R7 873 aaPredicted RBP12.9□□□□□ -0.34
SGCE-203ENST00000425444 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 ATG14Q6ZNE5 492 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 PARS2Q7L3T8 475 aaKnown RBP12.9□□□□□ -0.34
SGCE-203ENST00000425444 LSMEM2Q8N112 164 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 CASKIN2Q8WXE0 1202 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 KLK6Q92876 244 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 CELF6Q96J87 481 aaKnown RBP12.9□□□□□ -0.34
SGCE-203ENST00000425444 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 EIF3CQ99613 913 aaKnown RBP12.9□□□□□ -0.34
SGCE-203ENST00000425444 NCAPGQ9BPX3 1015 aa12.9□□□□□ -0.34
SGCE-203ENST00000425444 XPO4Q9C0E2 1151 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms