RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KRT71Q3SY84 523 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF766Q5HY98 468 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RIPPLY2Q5TAB7 128 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 AADACL4Q5VUY2 407 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PLAG1Q6DJT9 500 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 TTI2Q6NXR4 508 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 TMEM270Q6UE05 265 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RBPMS2Q6ZRY4 209 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 HTR3DQ70Z44 454 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 INTS8Q75QN2 995 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 BNIPLQ7Z465 357 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 MRGPRGQ86SM5 289 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 UNC5CLQ8IV45 518 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CMTM4Q8IZR5 234 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 KDM8Q8N371 416 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 DCLK2Q8N568 766 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 MINDY1Q8N5J2 469 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SLC15A4Q8N697 577 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SPERTQ8NA61 448 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 FAM184AQ8NB25 1140 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PIK3C3Q8NEB9 887 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 AGR3Q8TD06 166 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 C17orf50Q8WW18 174 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 THRSPQ92748 146 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 INTS12Q96CB8 462 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 HDAC11Q96DB2 347 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 NRBF2Q96F24 287 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ALG14Q96F25 216 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF512Q96ME7 567 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PPP1R10Q96QC0 940 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CD180Q99467 661 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PRRX2Q99811 253 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC106Q9BWC9 280 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CPEB1Q9BZB8 566 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 WDR11Q9BZH6 1224 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 NACAP1Q9BZK3 213 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SLC7A5P2Q9GIP4 190 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 FAM83DQ9H4H8 585 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RIBC2Q9H4K1 309 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 SLC32A1Q9H598 525 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 VCPKMTQ9H867 229 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 LANCL2Q9NS86 450 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 LIN7CQ9NUP9 197 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 RLIMQ9NVW2 624 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ALKBH4Q9NXW9 302 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 PSD3Q9NYI0 1048 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 CYP39A1Q9NYL5 469 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 INTS6Q9UL03 887 aaKnown RBP3.81□□□□□ -1.8
SF3B1-205ENST00000424674 ASB3Q9Y575 518 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 NFS1Q9Y697 457 aa3.81□□□□□ -1.8
SF3B1-205ENST00000424674 KDRP35968 1356 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 IL16Q14005 1332 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC187A0A096LP49 1063 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 OOEPA6NGQ2 149 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SH2D7A6NKC9 451 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ENO4A6NNW6 628 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TMEM233B4DJY2 109 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 EBAG9O00559 213 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 NRP1O14786 923 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 RNF113AO15541 343 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 BUB1O43683 1085 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 VEGFDO43915 354 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 NMT2O60551 498 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CYTIPO60759 359 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GPR32O75388 356 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 RPS6KA4O75676 772 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 LY86O95711 162 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 DDAH2O95865 285 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ITGB1P05556 798 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CD1AP06126 327 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 S100A9P06702 114 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 FAM86B2P0C5J1 330 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 COX7A2P14406 83 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GNAT2P19087 354 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 AVPR2P30518 371 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ICAM3P32942 547 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TTKP33981 857 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MDH1P40925 334 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SLC11A2P49281 568 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 VPS41P49754 854 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 RAB28P51157 221 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MFAP4P55083 255 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 NPEPPSP55786 919 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CTXN1P60606 82 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GRSF1Q12849 480 aaKnown RBP eCLIP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 SF3A3Q12874 501 aaKnown RBP eCLIP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TMEM115Q12893 351 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 IKQ13123 557 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GPM6BQ13491 265 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 TDGQ13569 410 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 THOC5Q13769 683 aaKnown RBP3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GAMTQ14353 236 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 CSHL1Q14406 222 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 GRM4Q14833 912 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 STK11Q15831 433 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 MST1LQ2TV78 715 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 HFEQ30201 348 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 FAM214AQ32MH5 1076 aa3.8□□□□□ -1.8
SF3B1-205ENST00000424674 ATAD3BQ5T9A4 648 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms