RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SPINT1O43278 529 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 TIMP2P16035 220 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CES1P23141 567 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CETN2P41208 172 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 SCNN1BP51168 640 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 SUOXP51687 545 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CREB5Q02930 508 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CCDC173Q0VFZ6 552 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 NOMO1Q15155 1222 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CSRP2Q16527 193 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 SYCP2LQ5T4T6 812 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CYP2U1Q7Z449 544 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 TRIM69Q86WT6 500 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 CAMK1DQ8IU85 385 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 ARRDC2Q8TBH0 407 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 ATP13A3Q9H7F0 1226 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 EBF2Q9HAK2 575 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 NOD2Q9HC29 1040 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 DYRK4Q9NR20 520 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 RBM22Q9NW64 420 aaKnown RBP eCLIP18.66■□□□□ 0.58
HDAC6-205ENST00000423941 PLXNA2O75051 1894 aa18.66■□□□□ 0.58
HDAC6-205ENST00000423941 EP300Q09472 2414 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-205ENST00000423941 HACD1B0YJ81 288 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 KCNK1O00180 336 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 TJP3O95049 919 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 PIGNO95427 931 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 ABL2P42684 1182 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 MAXP61244 160 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 ZNF211Q13398 564 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-205ENST00000423941 WDR45BQ5MNZ6 344 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 FBXL19Q6PCT2 694 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 BRAT1Q6PJG6 821 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 ARMCX6Q7L4S7 300 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 ALYREFQ86V81 257 aaKnown RBP18.65■□□□□ 0.58
HDAC6-205ENST00000423941 ZSWIM9Q86XI8 627 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 GPR161Q8N6U8 529 aaKnown RBP18.65■□□□□ 0.58
HDAC6-205ENST00000423941 ALS2CR12Q96Q35 445 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 TLR10Q9BXR5 811 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 POLR1EQ9GZS1 481 aaKnown RBP18.65■□□□□ 0.58
HDAC6-205ENST00000423941 NT5MQ9NPB1 228 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 VPS45Q9NRW7 570 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 SEMA4GQ9NTN9 838 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 TRPM6Q9BX84 2022 aa18.65■□□□□ 0.58
HDAC6-205ENST00000423941 PIEZO1Q92508 2521 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3DA0A087WVF3 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3IA0A087WXS9 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3EA0A087X179 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3KA0A087X1G2 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 A0A1W2PPC4 97 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TTC24A2A3L6 582 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3FA6NER0 549 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3LB9A6J9 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 ZSCAN12O43309 604 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 SOCS5O75159 536 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 JCHAINP01591 159 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 HLA-DQB2P05538 268 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3HP0C7X1 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 CD27P26842 260 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 MAOBP27338 520 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 SERPINA4P29622 427 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 PPP2CBP62714 309 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 PPP2CAP67775 309 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 BCL2L1Q07817 233 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 SPEM2Q0P670 501 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 AP1B1Q10567 949 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 ZBTB17Q13105 803 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 RPS6KA1Q15418 735 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 UGP2Q16851 508 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TMEM259Q4ZIN3 620 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3GQ6DHY5 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3CQ6IPX1 549 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 SLC23A3Q6PIS1 610 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TBC1D3Q8IZP1 549 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-205ENST00000423941 ACTL9Q8TC94 416 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TFB1MQ8WVM0 346 aaKnown RBP18.64■□□□□ 0.57
HDAC6-205ENST00000423941 PIGKQ92643 395 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 TADA1Q96BN2 335 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 SEMA3CQ99985 751 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 CARD9Q9H257 536 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 ZFR2Q9UPR6 939 aaKnown RBP18.64■□□□□ 0.57
HDAC6-205ENST00000423941 PCDH15Q96QU1 1955 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 LRRK1Q38SD2 2015 aa18.64■□□□□ 0.57
HDAC6-205ENST00000423941 A0A1W2PQ67 120 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 MTSS1O43312 755 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 TSPAN6O43657 245 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 FZD6O60353 706 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 MMP2P08253 660 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 NUDT1P36639 197 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 OTUD4Q01804 1114 aaKnown RBP18.63■□□□□ 0.57
HDAC6-205ENST00000423941 NIPAL4Q0D2K0 466 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 WASHC5Q12768 1159 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 DUOXA1Q1HG43 343 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 ZNF284Q2VY69 593 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 TEX44Q53QW1 395 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 SLC45A4Q5BKX6 768 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 TTC7BQ86TV6 843 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 ZSCAN30Q86W11 494 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 CEP76Q8TAP6 659 aa18.63■□□□□ 0.57
HDAC6-205ENST00000423941 QKIQ96PU8 341 aaKnown RBP eCLIP18.63■□□□□ 0.57
HDAC6-205ENST00000423941 CAPN10Q9HC96 672 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms