RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 PRB1P04280 392 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 RPIAP49247 311 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 TMPRSS3P57727 454 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 C3orf38Q5JPI3 329 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 TPRG1LQ5T0D9 272 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 CDKAL1Q5VV42 579 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 DNAJC24Q6P3W2 148 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 SCYL2Q6P3W7 929 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 RBFAQ8N0V3 343 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 RTL3Q8N8U3 475 aaKnown RBP16.36■□□□□ 0.21
COL18A1-205ENST00000423214 C3orf20Q8ND61 904 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 NEK11Q8NG66 645 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 ENOX1Q8TC92 643 aaKnown RBP16.36■□□□□ 0.21
COL18A1-205ENST00000423214 CENPIQ92674 756 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-205ENST00000423214 EPAS1Q99814 870 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 SLC13A1Q9BZW2 595 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 TTYH3Q9C0H2 523 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 SYNDIG1Q9H7V2 258 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 THSD1Q9NS62 852 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 KLF15Q9UIH9 416 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 SALL4Q9UJQ4 1053 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 KALRNO60229 2985 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 HELZ2Q9BYK8 2649 aaKnown RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 SCN8AQ9UQD0 1980 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 TPP1O14773 563 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 EPHB6O15197 1021 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 CREB3O43889 395 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 DXOO77932 396 aaKnown RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 ANXA6P08133 673 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 UNGP13051 313 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 TGM2P21980 687 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 RFC1P35251 1148 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 LSSP48449 732 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 UCNP55089 124 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 ERVPABLB-1P60509 514 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 YPEL5P62699 121 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 EIF2B5Q13144 721 aaKnown RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 CLEC16AQ2KHT3 1053 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 PRRT3Q5FWE3 981 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 CRTC1Q6UUV9 634 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 MACC1Q6ZN28 852 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 RBM44Q6ZP01 1051 aaKnown RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 PYROXD2Q8N2H3 581 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 TPCN2Q8NHX9 752 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 KCNE4Q8WWG9 221 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 NAT6Q93015 286 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 TBATAQ96M53 351 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 WRAP53Q9BUR4 548 aaKnown RBP16.35■□□□□ 0.21
COL18A1-205ENST00000423214 LRRC61Q9BV99 259 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 MAGEB5Q9BZ81 275 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 CATSPERBQ9H7T0 1116 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 FANCLQ9NW38 375 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 DOLKQ9UPQ8 538 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 SATB2Q9UPW6 733 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 MGAQ8IWI9 3026 aa16.35■□□□□ 0.21
COL18A1-205ENST00000423214 UNC13CQ8NB66 2214 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 EME2A4GXA9 379 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-205ENST00000423214 TOR1BO14657 336 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 AREL1O15033 823 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 MUSKO15146 869 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 CCP110O43303 1012 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 LZTS3O60299 673 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-205ENST00000423214 MMP20O60882 483 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 ELP6Q0PNE2 266 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 PTP4A2Q12974 167 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 C1orf61Q13536 156 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 ISXQ2M1V0 245 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 KLHL40Q2TBA0 621 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 PARP15Q460N3 678 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 C6orf132Q5T0Z8 1188 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 FAXCQ5TGI0 409 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 WDR59Q6PJI9 974 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 PHF13Q86YI8 300 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-205ENST00000423214 LSM14AQ8ND56 463 aaKnown RBP16.34■□□□□ 0.21
COL18A1-205ENST00000423214 CENPTQ96BT3 561 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 HMCESQ96FZ2 354 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 HIC2Q96JB3 615 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 EXOC2Q96KP1 924 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 MCEEQ96PE7 176 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 TCEAL2Q9H3H9 227 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-205ENST00000423214 SIK3Q9Y2K2 1263 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 COL6A6A6NMZ7 2263 aa16.34■□□□□ 0.21
COL18A1-205ENST00000423214 ARHGEF17Q96PE2 2063 aaPredicted RBP16.33■□□□□ 0.21
COL18A1-205ENST00000423214 RASA4BC9J798 803 aa16.33■□□□□ 0.2
COL18A1-205ENST00000423214 FGF10O15520 208 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-205ENST00000423214 RASA4O43374 803 aa16.33■□□□□ 0.2
COL18A1-205ENST00000423214 TCEA3O75764 348 aa16.33■□□□□ 0.2
COL18A1-205ENST00000423214 RBMS1P29558 406 aaKnown RBP16.33■□□□□ 0.2
COL18A1-205ENST00000423214 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.2
COL18A1-205ENST00000423214 BLKP51451 505 aa16.33■□□□□ 0.2
COL18A1-205ENST00000423214 COPB1P53618 953 aaKnown RBP16.33■□□□□ 0.2
COL18A1-205ENST00000423214 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
COL18A1-205ENST00000423214 YBEYP58557 167 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-205ENST00000423214 PPARDQ03181 441 aa16.33■□□□□ 0.2
COL18A1-205ENST00000423214 IRF4Q15306 451 aa16.33■□□□□ 0.2
COL18A1-205ENST00000423214 INO80DQ53TQ3 878 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms