RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MYEOVQ96EZ4 313 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 MAGEB10Q96LZ2 347 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 SPAG5Q96R06 1193 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 ACOX2Q99424 681 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 DDX50Q9BQ39 737 aaKnown RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 GPR27Q9NS67 375 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 XPO7Q9UIA9 1087 aaKnown RBP7.15□□□□□ -1.26
HMGN1-205ENST00000419378 GMEB2Q9UKD1 530 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 PCDHA9Q9Y5H5 950 aa7.15□□□□□ -1.26
HMGN1-205ENST00000419378 MUC22E2RYF6 1773 aaPredicted RBP7.15□□□□□ -1.27
HMGN1-205ENST00000419378 SYNJ2BP-COX16A0A087WUM0 186 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 A0A1W2PQF6 199 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 SMTNL1A8MU46 457 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 AQP7O14520 342 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 DCLK1O15075 740 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TBL1XO60907 577 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 RETP07949 1114 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 ZGLP1P0C6A0 271 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 MYCLP1P12525 358 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 CHRNB2P17787 502 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 PTMSP20962 102 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TACR2P21452 398 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 HLA-FP30511 346 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 MATKP42679 507 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 GABRB2P47870 512 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 GPR85P60893 370 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 RPS24P62847 133 aaKnown RBP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 CDK17Q00537 523 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 FMO1Q01740 532 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 IQCB1Q15051 598 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 EIF4HQ15056 248 aaKnown RBP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 PLK5Q496M5 336 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 C2CD6Q53TS8 623 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 MS4A13Q5J8X5 152 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 MPP7Q5T2T1 576 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 FAM102AQ5T9C2 384 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 HLA-DQA1Q5Y7H0 255 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 RAP1GAP2Q684P5 730 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TMEM215Q68D42 235 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 SDK1Q7Z5N4 2213 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 KBTBD6Q86V97 674 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 ERICH1Q86X53 443 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 MFN1Q8IWA4 741 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 KIAA2013Q8IYS2 634 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 AHI1Q8N157 1196 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 MSANTD4Q8NCY6 345 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 OLIG1Q8TAK6 271 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 WFDC5Q8TCV5 224 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 WFIKKN2Q8TEU8 576 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 HMGB4Q8WW32 186 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 CPA5Q8WXQ8 436 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 SORCS1Q8WY21 1168 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 C18orf8Q96DM3 657 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TMA16Q96EY4 203 aaKnown RBP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 GABRG3Q99928 467 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 CIPCQ9C0C6 399 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 CD248Q9HCU0 757 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 PARD6AQ9NPB6 346 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 ABCB8Q9NUT2 735 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 DDIT4Q9NX09 232 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 COX16Q9P0S2 106 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 CALCOCO1Q9P1Z2 691 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 BCCIPQ9P287 314 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 THAP10Q9P2Z0 257 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TNFRSF10DQ9UBN6 386 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 GGA2Q9UJY4 613 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TMEM59LQ9UK28 342 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 RAD54BQ9Y620 910 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 STON1Q9Y6Q2 735 aa7.14□□□□□ -1.27
HMGN1-205ENST00000419378 TYW5A2RUC4 315 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 C7orf72A4D263 438 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 FADS2P1A8MWK0 482 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 KCNU1A8MYU2 1149 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 WASH3PC4AMC7 463 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 F5H5T6 163 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 GOLGA8SH3BPF8 625 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 M0QYT0 321 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 NPC1O15118 1278 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 TEX33O43247 280 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 EPN2O95208 641 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 LUC7L3O95232 432 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CYP1A1P04798 512 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 SLC2A3P11169 496 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 UNGP13051 313 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 GABRG2P18507 467 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 BCKDHBP21953 392 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 FUT4P22083 530 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 TGM1P22735 817 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 MMP8P22894 467 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PRKCHP24723 683 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CCR1P32246 355 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CD70P32970 193 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 FLT3P36888 993 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 P2RY2P41231 377 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 IL12RB1P42701 662 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 SULT1E1P49888 294 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 HK2P52789 917 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 RNASE9P60153 205 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms